| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0662 |
|---|
| Symbol | |
|---|
| ID | 4256193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 776538 |
|---|
| End bp | 777713 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638121276 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_736722 |
|---|
| Protein GI | 114046172 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2807] Cyanate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.644367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATAA AAATTACCCA TAAATATCTC GTAGAAGGCT TGGTTTTTAC CAGTTACGTC
TTATTTGCAA TGGCATGGGT TGGCGGCACC GCGAGCATGA ATAACATCAT GGCCTCGATG
CACATCGAGA GTTATGCCTC CGCCAGTTTA CTGAGCGGCG CTGTCACCTT AGCCAAAATT
GTCGGCACCT TTGCTGCGGC CTATCTCACC CTCAAATTTG GGGTGAAGTA TGCGTTTTTA
GTCGCGGCAT TATTGATAGT CACTGGCATC ATGACACCCT ACGCCCCAAA CTATGAGTTA
CTGCTGGTGA GCCGCTTTTT AATGGGGCTG GGCGGCGCCT TTATGATTGT CTATTTCAAC
CCGATTGTGA TGCACTGGTT CGCCCCAGAA GAACGCCCTG TGATCAATGG ATTAAACGCG
GTGGCCTTTA ATGTGGGTAC GGCTATCGTG CTTTGGGGTA TGCCAAGCAT CAACGCCATC
AGCGGCGGTT GGCAACAAAG CCTGTTGGTG TTTTCCATTG CCAGTCTGGT ACTGGCGCTA
CTCTGGTTAT TGGTGAAGTT CGAACAAGCC CCTAGCCATC AAGCCCATGC ACAACAAGAC
GACACTCACT CATACTCCTA TCTCGATGGC TTAAAAGACG GCTTTAACTG GGCCTATGCC
CTCACCTACT CAGGATTATT ATCCTTTTAT ATTTGCCTAT TCACCTTTTA TCCGCAGGCG
GGCATCAGCC AGAGTAAGTG GGTGATTGGT TTTGGGATTG TCGGCACCAT AGCGGGGATA
CTCTACAGCC GTAAACAGCC CCTGCGCTTG CCAATTATTC GCCTCAGCGG CCTGCTTATT
TTCTTAACCG TGTTAGGGCT CTCCTTTGGC TCGGCGCCTT GGCTGCAAAC CCTGTGCGCC
ATCGTCTTAG GCTTTTGCAT CTTTTTACCC GTCACCGCTT TAGTCTCGAT TCCCCACGAG
CTACCTAAGA TGACCAGTCA AAAAATCACG GTGATTTTTA GCCTGTTTTG GTCCATCAGC
TATCTGATTT CGACCTTAGT GCTATGGCTG TTTGGCAAGC TCGTGGATAT CAACCAAGGC
AGTTACTTCG CCTCGTTTGT GCTGATCACC CTATTAAGCG CAACAGTGTT TATTGGCAGC
TATTTTCTCC CCGAAACCGG ACAAGCTAAG GAGTAA
|
|---|
| Protein sequence | MPIKITHKYL VEGLVFTSYV LFAMAWVGGT ASMNNIMASM HIESYASASL LSGAVTLAKI
VGTFAAAYLT LKFGVKYAFL VAALLIVTGI MTPYAPNYEL LLVSRFLMGL GGAFMIVYFN
PIVMHWFAPE ERPVINGLNA VAFNVGTAIV LWGMPSINAI SGGWQQSLLV FSIASLVLAL
LWLLVKFEQA PSHQAHAQQD DTHSYSYLDG LKDGFNWAYA LTYSGLLSFY ICLFTFYPQA
GISQSKWVIG FGIVGTIAGI LYSRKQPLRL PIIRLSGLLI FLTVLGLSFG SAPWLQTLCA
IVLGFCIFLP VTALVSIPHE LPKMTSQKIT VIFSLFWSIS YLISTLVLWL FGKLVDINQG
SYFASFVLIT LLSATVFIGS YFLPETGQAK E
|
|---|
| |