| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0476 |
|---|
| Symbol | |
|---|
| ID | 4255603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 539911 |
|---|
| End bp | 540774 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638121090 |
|---|
| Product | methylation site containing protein |
|---|
| Protein accession | YP_736536 |
|---|
| Protein GI | 114045986 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0553768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCTT TATCCGCAAA GCGCATGGCG CGCTCCAAAC GGGGTTTTAC CTTAGTCGAA
ATGGTCACTG TGATCCTTAT CTTAGGCATT CTGGTGGTGG GCGTGAGTAG CTTTATTATT
TTCGGCACGC GGATTTTTGT GGAGTCGAGC TCGGTCGATC AAGTGCTAAG CCAGAGCCGT
TTCGCTGTCG AGCGTATGAC CCGTGAGCTG CGCAGCGCCT TGCCTAACAG TGTGCGGCTC
AATGGTAATG GCTTAACCTA TCAGTGCGTA GAGTTTGTCC CCATTGAGGC GAGCACCACT
TATTTATCGA TGCCGATTGC GCCGAGTGCC GCAGCCTTAA CGGGAACAGT AATTCTCAAT
GCGACCGATA ACATTAAGGA CAACCAATAT ATTTGGATTT ATCCTTTGAC TGATAGCGAT
GTCTATAACA GCGCCAGACA AAAACGGGCA CAGATTAAGA CTTTTACTCC CCTAGGTGAG
TCGCCTAATC CGGCTAATCA AGTCACTCTT ACCTTTATGG CATCAACACG CTTTGCCGAA
GCATCACCGC GGCAGCGAGT TTATTTTGGT TCGAGTCCTG TGAGTTATTG TTTTGAAAAA
GCACCATCCA GCAATGAGTT AACCTTAAAG CGTTATACTG GTTATGGGTT GAATGTTAGC
CTACCCACGC CTAGCAGCAT GAGTGCTGGG GTGTTAATGG CGCAGAATGT GGCCAATGCA
TTGAACGACA GTGCCGATTT ACCGCTGATA TTAACGCCAT CGAGCCTAGT CAATAATGCT
ATGGTGCATT TACAACCGCG ATTTAATGTC AACGGCGAGA CATTTCAATA TCGACATCAA
GTGCAGGTGA TTAATGTCCC CTAA
|
|---|
| Protein sequence | MRSLSAKRMA RSKRGFTLVE MVTVILILGI LVVGVSSFII FGTRIFVESS SVDQVLSQSR
FAVERMTREL RSALPNSVRL NGNGLTYQCV EFVPIEASTT YLSMPIAPSA AALTGTVILN
ATDNIKDNQY IWIYPLTDSD VYNSARQKRA QIKTFTPLGE SPNPANQVTL TFMASTRFAE
ASPRQRVYFG SSPVSYCFEK APSSNELTLK RYTGYGLNVS LPTPSSMSAG VLMAQNVANA
LNDSADLPLI LTPSSLVNNA MVHLQPRFNV NGETFQYRHQ VQVINVP
|
|---|
| |