| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0468 |
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| Symbol | |
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| ID | 4256684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 532393 |
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| End bp | 533718 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121082 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_736528 |
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| Protein GI | 114045978 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA TCAACAAGAT GCTGCAGGAT CTCGAAAAGC GCCAGCAGGG GCATTCTCTC
AGTAATGTCG CTGTGCATCA GGCGCAGTAT TTAGGGCGCC CTAATCCATC ACGCAAATGG
TTAGTAATCA GCTTAGTGTC GCTGCTGGTG GGCGGCTTAT CGGTCTATGC TTTTCAGGCG
AGTTACGGCG TAAAGAGCAT TGCTGATAAC ATTGCAAATC CTGTGATGAG TTTGCAAACT
CAGCCGGATA ACGGCAGCCC ACAGATAGAT ACGAGTCCTC TGGAAACCGA AACGACGACA
TCTACAGAGC CAACTGCCGA GATGGCGCAA GTGAGTCCGT CATCGACAGA GGTTCCTGCA
AAGGATATGT CTGCGTCAGC AGAATCTGCC CCAAGAGTGG CTCAATCTCC CCGTGTCAAC
GCGGCGCAGG TAGAACCAAC GAGTGAACCG ATAACCGAAT CAGTTGCGGC AAGCCCCTCA
ACCGATACGC CTAACAAGGC GGTATTAACC CAAGAGCAGG CGCAAACACA GGCTGAGCCA
CAACAGGTTG CGGTTAAAGT AAATCAAGCA GACGTTAACG CAAATCAGAG CGAAGTAAAA
ATTACTCAAA CAGAGCCTAA GGCGAGTGAG CCTTTCGTGC CTGCTGCGAC TCAAGCTTCG
AGCCAAACTA CGCCTCAAGC TTCAAGCCAA GCTTCGCCTC AGGCTCAGTC AACGGGGCAA
ATGGCGATTA GAGAAGTGAA GTTGTCCCCA AGCCAACTCG CGCAAAAGCA GTTAGTGTTA
GCGGCGGATG CCGAAAAGCA GGGGCAGCTG GTTAAGGCGA TGGATTACTA CGCTAAAGCA
CTCAAGCTCG ACCCAAGCTT GCACGAGTCG CGCAAACAAC TGGCGGCACT GCATTATGGT
CAAGGTGAGC TGGCGCAAGC GGCCGAAGTG TTGGCGCAGG GACGATTGCT TTATCCGCAA
GAGTTTGAAT TTGCTTTGCT ATTGGCAAGG GTGCAACATG CTATGGGCGA GACAGATTCG
GCTCTTGCTA GCCTTGCTCA AATCCCCGAT AGCCATAGCT TGGCGAGGCA AAAGTGGTTA
GCGCAAACGG ATTTGGCCCA AAAACAAGGG CAATATCCGT TAGTCGAGCA GGCTTACCGT
AAGTTATTGC AGCAAGAGCC ACAGCAGGGG AAATGGTGGA TGGGATTAGC CTATGCCCTC
GATTCACAGC AACAATTCGG CCCCGCCAGT CAGGCCTATC GCACCGCCTT AAGTTATTCA
GGCCTGTCGA CCCAAGCCAC GGCTTTTATT GAACAACGTT TACAACAACT AGGAGATAGC
CAATGA
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| Protein sequence | MSVINKMLQD LEKRQQGHSL SNVAVHQAQY LGRPNPSRKW LVISLVSLLV GGLSVYAFQA
SYGVKSIADN IANPVMSLQT QPDNGSPQID TSPLETETTT STEPTAEMAQ VSPSSTEVPA
KDMSASAESA PRVAQSPRVN AAQVEPTSEP ITESVAASPS TDTPNKAVLT QEQAQTQAEP
QQVAVKVNQA DVNANQSEVK ITQTEPKASE PFVPAATQAS SQTTPQASSQ ASPQAQSTGQ
MAIREVKLSP SQLAQKQLVL AADAEKQGQL VKAMDYYAKA LKLDPSLHES RKQLAALHYG
QGELAQAAEV LAQGRLLYPQ EFEFALLLAR VQHAMGETDS ALASLAQIPD SHSLARQKWL
AQTDLAQKQG QYPLVEQAYR KLLQQEPQQG KWWMGLAYAL DSQQQFGPAS QAYRTALSYS
GLSTQATAFI EQRLQQLGDS Q
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