Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0430 |
Symbol | |
ID | 4255662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 489220 |
End bp | 490941 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638121044 |
Product | NACHT family-like NTPase |
Protein accession | YP_736490 |
Protein GI | 114045940 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5635] Predicted NTPase (NACHT family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00169219 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAAC AAGTTGTTGT TACCGAATCC TTCAAAGCAA TATTTAATGA AGCTATCGCC TTTATTAAGT CAAAATCAAA GTCTTTTAAA ACCCTTAACC AAATAAAGCT TGAAGATGCA TACGCTAAAG CAGCAAACGT CGAAAACGTT AAAACCATAT GGCAAATAGA CAAAAGCGTA AACTTAAATG AATTCTATCA CCCATCAACA ATTAAAGTAT TAGACCAGCT AATATGTGTA GACTCTTTAA ATATATTCCC TGAAAATGGT AAAATTGTTA TCCAAGGTAC CGCTGGACAA GGAAAATCCA TTCTCTTAAG ATATTTGGCA GGAGTTAATC TAAAAAAGGG AAAAACTATT CCTATTTTTA TAGAACTTAG AAAAATTACT GAAAAAACAA ACCTTTCCGC CTTAATAGCA ATGTCCATGT CAGAGCTGGG TATTAATATA GAGGAAAAGG ATCTTGAATT TATATTTTCT TCTGGAAAAT TCACGTTATT ATTGGATGCC TTTGATGAAA TACCAGAATT ATGTTTAAAA GACACTCTGT TATCCATAGA AAATATTTGT GCTAGGAATT ATAATCAGCA AATAATTATT ACATCACGCC CGGGTTCTGA CATCCAAAAA GTATCTTATT TTTCAGTATA TAATCTTCAA CCTCTAAAGC CCCCCGATTT CAAACCTATG CTGCAAAAAT TCTTTGACGA TGAAGTAACT GTTCATCGAA TAATGAAAGC ATTAAACGAA AATAATAGTA CCATTACTAA GTTAATAACC ACCCCCTTAC TATTAACCTT ATTGGCCATA ACATATAAAA CGTATCATAA GATACCAACC CAACTTCATG AGTTTTATGA AAATATATTT CATGTATTAG CTAATCGACA CGACGCAACA AAGCCTGGCT TTAGACGAGA ATATAAATCA GGTTTAAATG AGCGTGAGCT AGAAGATCTT TTCTGTGCAT TTTGTTTTTA TAGCATGATT GAAGATAAGA GTTCTCTTTC AAGGCAAGAA GCATTAAGTG TCACTAAAAA GGCAATCCAC TTCTTAAGTA TAAATCCAAT TTCTGAGTTT TCATTCTTAA GTGATTGCAT AAAAAACACC TGCTTACTAT TAGAAGAAGG TTTTAGTTAT CATTACATAC ATAAAAGTAT AAGGGAGTAT CACTCAGCTA AATTCATCAG CATTAGCCCT ATAGAGCTAA AAGAGAAGTT TTACACAATA GCAACATCAA ACTTTTACAA ATACAGAGTC GAGCTTGAGT TTTTAAAAGT AATTGACGAA CACTGTTTTT ACAAAAATTT CTTTCTACCA ATCTACAGGA AAATATTTGA TGACCTTGGA ATCTCAACAG AATATAGAGA AGTCAATTAT CAAGAATTAC TTTTAGACTC AAAGATTATT TTTGAAAAAC ATGGTTCAGA GATGTTACTT CACGCCTTTG CATTTTCTGA ACGACCTGCT TTAAACTTGG ATTACATGAA CGACCTTCAT GACAAACTAC TAAATTCAAT ATTCAAACTA GTTAGAAAGT TTGAGATAAA CCAAAAACAA TCTGAACACA TATTAATTAC AGAAATAATA AAAAATGAAG GCCTTGAGGA TGAATTCAAT ATCATCATTA ACGAATGCAT AGAAACAATG TTTAAACGAT ACTCTGAGGC AAACTTAAAG TTCAGAAGTA AAAATGAATT AATATCAAAT ATGAGCTTTT AA
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Protein sequence | MLEQVVVTES FKAIFNEAIA FIKSKSKSFK TLNQIKLEDA YAKAANVENV KTIWQIDKSV NLNEFYHPST IKVLDQLICV DSLNIFPENG KIVIQGTAGQ GKSILLRYLA GVNLKKGKTI PIFIELRKIT EKTNLSALIA MSMSELGINI EEKDLEFIFS SGKFTLLLDA FDEIPELCLK DTLLSIENIC ARNYNQQIII TSRPGSDIQK VSYFSVYNLQ PLKPPDFKPM LQKFFDDEVT VHRIMKALNE NNSTITKLIT TPLLLTLLAI TYKTYHKIPT QLHEFYENIF HVLANRHDAT KPGFRREYKS GLNERELEDL FCAFCFYSMI EDKSSLSRQE ALSVTKKAIH FLSINPISEF SFLSDCIKNT CLLLEEGFSY HYIHKSIREY HSAKFISISP IELKEKFYTI ATSNFYKYRV ELEFLKVIDE HCFYKNFFLP IYRKIFDDLG ISTEYREVNY QELLLDSKII FEKHGSEMLL HAFAFSERPA LNLDYMNDLH DKLLNSIFKL VRKFEINQKQ SEHILITEII KNEGLEDEFN IIINECIETM FKRYSEANLK FRSKNELISN MSF
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