| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0428 |
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| Symbol | |
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| ID | 4255660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 486417 |
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| End bp | 487127 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121042 |
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| Product | C factor cell-cell signaling protein |
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| Protein accession | YP_736488 |
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| Protein GI | 114045938 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT TAGTGTTAGG CGGTAGCGGT GGCATAGGCC ACGCTATGGT GAATAAGCTG
CGCGAAATCT ATCCCGAGGC CACTATCCAT ACGACCTATA AACATCATAG GCCCGATACA
GGGCGAGACG ATGGTGTGAT TTGGCATCAA CTGGATATCA CCCTTGAGGA GGAGATTAAG
CAACTGAGTC AGAATATCCC CCAATTAGAT TGGCTGATTA ACTGTATTGG CATGCTGCAC
ACGGAGGATA AGGGGCCAGA AAAAAGCCTG CAGGCACTCG ATGGGGATTT TTTACAGCAC
AATATCCAGC TTAATACGCT GCCGAGTATG ATGCTGGCAA AGCACTTTGA AACGGCGCTA
AAACGCAGTG TGTCGGTAAG ATTTGCCGTG GTATCGGCCA AAGTCGGCAG CATTAGCGAT
AACAGATTAG GTGGTTGGTA CAGCTATCGC GCCTCGAAAG CGGCGCTGAA TATGTTCCTC
AAAACGCTAT CGATTGAATG GCAGAGAAGC ATGAAACACT GCGTGGTACT AGCACTGCAT
CCCGGCACTA CGGATACGCG CTTATCCAAA CCTTTTCAGC AAAACGTGCC CAAAGAAAAG
CTGTTTACAC CAGAGTATGT CGCCCAATGT TTAGTCAGTA TTATCGCCAA TGCCACACCA
GCACAAACGG GCAGCTTTTT GGCCTACGAT GGTGCAGAGC TGCCTTGGTA G
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| Protein sequence | MNILVLGGSG GIGHAMVNKL REIYPEATIH TTYKHHRPDT GRDDGVIWHQ LDITLEEEIK
QLSQNIPQLD WLINCIGMLH TEDKGPEKSL QALDGDFLQH NIQLNTLPSM MLAKHFETAL
KRSVSVRFAV VSAKVGSISD NRLGGWYSYR ASKAALNMFL KTLSIEWQRS MKHCVVLALH
PGTTDTRLSK PFQQNVPKEK LFTPEYVAQC LVSIIANATP AQTGSFLAYD GAELPW
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