| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0375 |
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| Symbol | |
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| ID | 4258580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 417274 |
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| End bp | 418353 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120980 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_736435 |
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| Protein GI | 114045885 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.798295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCT CAAATAAGCT GAATACAAGC ACTGCCGACT CTAGGCGCCC TATTGGCTTA
ATACTACAAA CCTTACATAA ATGGCTAGGG CTTATTGTTG GCTTACAGTT ATTAATTTGG
ATCGTGACAG GGCTGGCCTT TAACCTGATT GACGAGCAGT TTCTGGACGC TAATCAATAT
CGCACCACGC ATCAAACAGC GAGTCCCACT ACAGCACCCG CCCCCGCGGC AAACCTACTG
CAGCAATATC AAGCCGAGGG TATTATCGAA CTTACGTTAA CCTCAGTGCT CGAACGCGCC
GTGTACACAC TCATCACAGC TCAGCAAACC CGCTGGTTTT GGGCAGACTC ACTCCAACCA
CTATCCTTGA ACGATGCAGA GATACTCGCT ATTGCCAAAC AGAGTTACTC AGGCTCAGGT
GAACTCAGCG CACCGCAAAT CCTTACCCAT GAAACACCAT TCGACGCCAG TGGCCCAGTT
GCTATGCTGA TAGCCGCGGA CGAAGTTGGA ACGCGGATTT ATATCGATAC GGCCTCGGGT
ACGGTGCTTG CCCACCAAAA TAGCCAATCG GATCTCAAGG ATCTGCTCTT TATGCTGCAT
TTTATGGATT ATGCTCCCGA TAATGGCATT GGTTTTAATC ACTTATTGGT ACAACTTGTT
AGCATTGCCG CGCTGTTGTT AGGTCTTTCT GGGATTTACA TCCTCGGGCA TAAATTCCAT
CAAGGTCAGT TGTCACTGCC TTTCTTGAGA CGAAAAACCG CCATAGGAAA ACTGGTGCTT
TTTACTCAGG ATGCTCAGCT GCTCGCCGAA TTTACGGAGC TCAGTGGCAC TTATCTAGAG
AGTATTAATC AAGGACGTGA AAGGCTAAGA ACCCAATGCG GCGGTGGTGG ACGCTGCGGC
CTGTGTAAAC TGAGATTTGT CGAGCAACCG CCTGCGCCCA ACGACTATGA TCTGGATAAA
CTCACCGCCA CCGAGCTTGA ACAGGGTATT CGCCTGAGTT GCCAACACGA GGCAAGTCCT
CGCAAACTTG CACTAGTCAC TAAGGCGCAA CACAGATATT GGCCGCAGTT AGAGCGCTAG
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| Protein sequence | MSFSNKLNTS TADSRRPIGL ILQTLHKWLG LIVGLQLLIW IVTGLAFNLI DEQFLDANQY
RTTHQTASPT TAPAPAANLL QQYQAEGIIE LTLTSVLERA VYTLITAQQT RWFWADSLQP
LSLNDAEILA IAKQSYSGSG ELSAPQILTH ETPFDASGPV AMLIAADEVG TRIYIDTASG
TVLAHQNSQS DLKDLLFMLH FMDYAPDNGI GFNHLLVQLV SIAALLLGLS GIYILGHKFH
QGQLSLPFLR RKTAIGKLVL FTQDAQLLAE FTELSGTYLE SINQGRERLR TQCGGGGRCG
LCKLRFVEQP PAPNDYDLDK LTATELEQGI RLSCQHEASP RKLALVTKAQ HRYWPQLER
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