Gene Shewmr7_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0287 
Symbol 
ID4258338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp317767 
End bp319203 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content46% 
IMG OID638120894 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_736349 
Protein GI114045799 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGC ATTTATTTAA CAAGCTAGCT TCATTTGCTT CTATTATTAT CATGGCATTA 
CCCGTTGGTA TTGCTTGTTT TATTTTCGGT TTTATTTATT TAGATAACCC TTGTGCTTTC
TGTTGGCAAG AACGTACTGC CATGATCTTA GTGGCGCTAA CGGCACTCTA TATCGTCCGC
TTTGGCCTAA AACCTAAATA TATCGCTGCG CTAGTTTGGC TTGGAATATA TGGTGCCTTT
ATGGCCTCAG TTCATACCTC TATCAATTTA GGCAGTGATA TTGGCCAAGG TTTCTCACTA
AAAATTATGG GCGCTCATAC CTACACTTGG GCGCTATTCG TGTTTGTCGT TGTGCTTATT
GTGGTGGCAT TACTCATGCT CACACTGGGT AATAAATTCC CTAGTAACGG CTACGGTAAG
CAACCACTCG ATACACTTCC AAAGATTGCC TGTGGGGTAT TCCTAGTCGT GATCAGTGGC
AATATTGTCC AAGCCTTTAC GCAAACAGGT CCTCTGCCCT TCGTTGGTCA AGATAGCCCT
GGCCGAGTCT CTTTTAATCC TCAATTCATG AGTTGGGAGC TCGACCATTG GCCAACTTAT
GCACCTAATG CCCGCGGTGC TTATGCCATT GATAATCCCG ATATTGAGAC TTGGCAACTA
ACAGAACCGC TATTTGCGGA GGTGCCTAGA GCGAAATTAG TTGCAGAACA AGTACTGCCA
TCGGAGATAA GTGGACGTGT GACTGCCATT GACTATCAAG CCGAAGCAGA AATTTATGCC
CTGACGACGA CGGATAATTG GGTTTATATC CTCGACAAGC AGATGCAAAT CCTCAGCAAG
GCTCAAATTG ATGGCATGTA TATGCTGCAT ATCGAAACGC TTCAGGGGGT TGCCTTTACT
TCAAGCAACA GCCTGCTGGT GATGGGCTTC AATAAGGCAT GGGCAGAATT GACCCTAGAT
CCTGCACAAA ACTGGGAGAT GAACTATCGC CGCTTCAACC AGAGTAGCGA TGGCATAGGT
GAAACCGCTC GCGGCCAGTT CAGCACAGTA CGCGCTAAAA CCAGCTACAG CTTGGCATTA
GGTTACAGCA GTACACTCGC ACAATTTGTC ACAGTGACGA CCCGCGATGC GCTCAATGAA
CACTTAGTGT TATCACGCTT TGACCACACA GATATGACGC TCTCTGCCGA ATCTAATCTG
CAAGGTCTCC CTGCATTACC ACAGATAACG GGCATCAGCG TTCAAGGTGA GCAAGCTTGG
ATCCTCAACA ATGATGGCAG CGAGATACTT AAGCTCAATC TGCTTACAGG CGAAGTAGCG
CCTATGGCCA AACTGGCTGG CACGAACAAT CCGCAAGGAC TGTTAGTACA GGATGGCAAG
CTGGTAACCA TCAGCCAAAT CAATGGGCAA AACCAACTAC AAACCTATGT GATGTAA
 
Protein sequence
MKEHLFNKLA SFASIIIMAL PVGIACFIFG FIYLDNPCAF CWQERTAMIL VALTALYIVR 
FGLKPKYIAA LVWLGIYGAF MASVHTSINL GSDIGQGFSL KIMGAHTYTW ALFVFVVVLI
VVALLMLTLG NKFPSNGYGK QPLDTLPKIA CGVFLVVISG NIVQAFTQTG PLPFVGQDSP
GRVSFNPQFM SWELDHWPTY APNARGAYAI DNPDIETWQL TEPLFAEVPR AKLVAEQVLP
SEISGRVTAI DYQAEAEIYA LTTTDNWVYI LDKQMQILSK AQIDGMYMLH IETLQGVAFT
SSNSLLVMGF NKAWAELTLD PAQNWEMNYR RFNQSSDGIG ETARGQFSTV RAKTSYSLAL
GYSSTLAQFV TVTTRDALNE HLVLSRFDHT DMTLSAESNL QGLPALPQIT GISVQGEQAW
ILNNDGSEIL KLNLLTGEVA PMAKLAGTNN PQGLLVQDGK LVTISQINGQ NQLQTYVM