Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0058 |
Symbol | |
ID | 4256592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 69785 |
End bp | 70522 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120653 |
Product | hypothetical protein |
Protein accession | YP_736121 |
Protein GI | 114045571 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.101674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000370653 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAACAG ACCCTCTTTT TTGGCTGGTG GCGATTCCAG CGGTGTTGAT CACTGGGATC TCTAAATCGG GTTTTGCCGG CGGCGTCGGT GGCCTGACCG TGCCCCTGTT AGCGCTGGCC ATAAGCCCGG CAACAGCGGC GGCAATCATG TTGCCACTGC TGATTTATAT GGATTTTTTA AGTGTTCGCT CCTGGTGGGG CCAACATAAT CCTCGCCAAT TATGGATCCT TTTACCCGCA GCGATTGTGG GCATAGGCAT AGCCTATTGG CTGTTCGACC GCTTAAACGA AGATTACTTA CGGGCGATTT TAGGCTGTGT GTCCTTAGGT TTTGGCCTTT ATGGCTTGAT ATTAGGGGAT AAAACCCAAG CAACGCCTTC GCCACTCGTG GGGCGGCTTT GCGGCTTAAC CGCAGGCTTT ACTAGCTTTG TGGCCCATGC GGGTGGGCCG CCACTCAATG CCTATTTGCT GCCGTTACGC TTGGCCAAGC CAGAGTTTTT AGCCACGGCA GTGGTATTTT TTGCGGTGGT GAATCTGGTT AAGTTGGTGC CCTACAGTCT GCTCGGGCAA ATTAACCAAG GTAACATTCT GATTTCGCTA TTACTTGCGC CTTTGGCTTG GTTAGGCGTA AAACTGGGGC TGGCGATCCA AGATAAGATC AGCGATAGGT TGTTTAAACG CATCATCTTG ATTTTAATGG TGCTGGTGGG TATTCGTTTA TTGTGGACGG CGTTATAG
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Protein sequence | MLTDPLFWLV AIPAVLITGI SKSGFAGGVG GLTVPLLALA ISPATAAAIM LPLLIYMDFL SVRSWWGQHN PRQLWILLPA AIVGIGIAYW LFDRLNEDYL RAILGCVSLG FGLYGLILGD KTQATPSPLV GRLCGLTAGF TSFVAHAGGP PLNAYLLPLR LAKPEFLATA VVFFAVVNLV KLVPYSLLGQ INQGNILISL LLAPLAWLGV KLGLAIQDKI SDRLFKRIIL ILMVLVGIRL LWTAL
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