Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3887 |
Symbol | |
ID | 4254450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4637484 |
End bp | 4638956 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120532 |
Product | hypothetical protein |
Protein accession | YP_736007 |
Protein GI | 113972214 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCTT TTTTGACCCC CTCTATCCTC GCTGCTAGCG TTGCATCTGG TTTACTATTT TCTGCTTCCG TTGCTGCCGC CCCTTGGGTG GATGCCTCGG ACATTTATTT AAGAGCCGAT ATTCAAGCAC TGGCCGATGC GGGCGTGATC CGGGTGCCAG TGAATACCTT TCCCTTGATG TGGTCTGGAA TTGGTGGCGA CTTAGCGAAA GTCGAACCCG AGCTATTGTC TCCCCGATTA GTGCAAGCCT TTGCCCGAGT TAACTTTTAC TATCAAAATG CCGTCGATAA TCGCGGCAAT GCTAGGGTTA AACTCTCGGG GGCGACCGAT CCCGCTCGCT TCCAGCATTA TGGCTCCGAC TACCGTGAAA AGGGTGAGGC TAAAGCCTCA TACGAATACT TAGGCTCACG TGTGGCCTAT AAAACCACAG TTGCTGAGAC CTACGATCCG CAAGATAACA AAAACTTCCG TCTCGATGAG TCTTATTTTG CTGTAATCAT GGGGAACTGG ATTGCGACCT TAGGTACGGT TGAGCAGTGG TGGGGGCCGG GATTTGATTC GGCATTGCAT CGCTCTAACA ATGCGCGTCC AATGCAGTCA CTGTCGCTCA GCCGTAATAA TGCCGCCGCC TTCGAAACGC CATGGTTATC TTGGATTGGT CCTTGGACCT TCAAGACCGG TTTTAGCATG GCAGAAAAAG AGCGTGCCGT GTCTAAAACG GCGGAATGGG ATATGCGCTT TACCGCCAAA CCGATCCAGC AGTTAGAAAT TGGCCTGTCT TGGTCGACAC TCTTTTGCGG TGAAGGGCAG AATTGCGACG TCGATTCTTG GTGGGACTCG GTGGCAAGCA ATGCGGTGTG TATCGACGGT TCGGATTCTT GCTTGGCCGA TCAACGCCGT GACGCTGGCC ATAGAACCCA GAGCATCGAT TTACGTTATG CCGACACTTG GCAGGATATC CCCGTGGGTT TGTACCTTGA GCATAGCTGT GAAAACGGCA GCGATTGCGG CTCACTTTGG GGGATAGATA CTCATTTCGG CACCTCGGGT AAACAGTTCA AGCTGTTTAT GGAATACTCG GACACTTTTG TTGAGTGTGG TGGCAAGGCG AATTGTTTCT ATGAAGATCC TGTCTACCTG AGTGGGGCGC GTTACTACGG CAGAGCCTTA GGCTCGACCT ATGATAGCGA TGCTCAAGTC TTTGTGTTCG GTTTGGTTGG TCAGTTCCAT AACAGCCGCG GTTTTACCTC GTTACTGCGT TATGCCAAGT TGAATAAAGA CGGCACCAAT GTGGCGACCA CATGGGCGCC ACAGCCACCG AAGGAAGACT TGCTGATGCT GGAACTTTCT TACCGTATGC CTGTGTGGAA GGGCATGTGG AGTCTGGGCG GTACAGTATC GAGATCGGAA TTTGATGTAC AAGAAAACGA TACTAATGCG ACTTTCTTCA GCAGTTTTGA ATACCGTTTT TAA
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Protein sequence | MKAFLTPSIL AASVASGLLF SASVAAAPWV DASDIYLRAD IQALADAGVI RVPVNTFPLM WSGIGGDLAK VEPELLSPRL VQAFARVNFY YQNAVDNRGN ARVKLSGATD PARFQHYGSD YREKGEAKAS YEYLGSRVAY KTTVAETYDP QDNKNFRLDE SYFAVIMGNW IATLGTVEQW WGPGFDSALH RSNNARPMQS LSLSRNNAAA FETPWLSWIG PWTFKTGFSM AEKERAVSKT AEWDMRFTAK PIQQLEIGLS WSTLFCGEGQ NCDVDSWWDS VASNAVCIDG SDSCLADQRR DAGHRTQSID LRYADTWQDI PVGLYLEHSC ENGSDCGSLW GIDTHFGTSG KQFKLFMEYS DTFVECGGKA NCFYEDPVYL SGARYYGRAL GSTYDSDAQV FVFGLVGQFH NSRGFTSLLR YAKLNKDGTN VATTWAPQPP KEDLLMLELS YRMPVWKGMW SLGGTVSRSE FDVQENDTNA TFFSSFEYRF
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