Gene Shewmr4_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3843 
Symbol 
ID4254406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4589300 
End bp4590136 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content47% 
IMG OID638120488 
Producthypothetical protein 
Protein accessionYP_735963 
Protein GI113972170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCACT GTATTAGAAT ATCGCCATAC TTTGCATCTA GATCAGATTT CGATATGGCC 
GCTCTAAACC CCTTCATCTT AAGCACCTTA AGTGTCCTTA GCTTAACCTG TGTAAGCAAC
GGCTGGGCGA ATGAAAACTT AGTGCAAACC GAAGGCGTAA GTAGCGGCGT ATTACCCACA
TCGACAGCAG AATGGGCAAT TAACTTAGAT TTAGGCTGGG ACAGCAAGTA TGTTTCGCAA
GGGCGTAATA ACTTGGAGCA TGGCGGTATC TATTGGATGA ATGCCAGCGT TGAGTACGGC
AACCTGACAA CCTACGCCCT TGTCGGGCGC GGCGATAGTC AGGCTTATAC CGAGTGGAAC
ATTGGCCTAG AATACGCATT ACACCTCAGT GAAGATATTG AAGCACATGT GGGCTATCAA
CGGATTGAAG GCTATAGCAA TAGCCGCTGT CAAGATAACG AACTGTTTGC CGAGCTGGCT
TACAATGCCG TGACCTGGTT GGTGCCTTCG GCGAGTTATG TATATTCCAC CGAGGCGGCA
GGCTATTTTA TCGAACTGAG TCTACACAGC TATTGGCAAC TTAGCGAACG CTTCATCCTC
GCCCCTTACA TTACCCAAGG GCTTGATTTT AAATATCGAA CAGAAGATCA CAATGGCCGC
AATCATCTGC AATTTGGTTT AGAGGCCAAT TATGATCTGG CCGATAATAT GAGTCTCGGT
GGCCATATTA GCCACAGCAT AGCTCAGGCG GATATTGAGC AAGAAGCCAC TGCCAATGGC
GACTTTAGCT CGCAGGATCA AACCTATGCG GGTATCCACT TCAATATCAG CTTCTAA
 
Protein sequence
MFHCIRISPY FASRSDFDMA ALNPFILSTL SVLSLTCVSN GWANENLVQT EGVSSGVLPT 
STAEWAINLD LGWDSKYVSQ GRNNLEHGGI YWMNASVEYG NLTTYALVGR GDSQAYTEWN
IGLEYALHLS EDIEAHVGYQ RIEGYSNSRC QDNELFAELA YNAVTWLVPS ASYVYSTEAA
GYFIELSLHS YWQLSERFIL APYITQGLDF KYRTEDHNGR NHLQFGLEAN YDLADNMSLG
GHISHSIAQA DIEQEATANG DFSSQDQTYA GIHFNISF