Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3843 |
Symbol | |
ID | 4254406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4589300 |
End bp | 4590136 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120488 |
Product | hypothetical protein |
Protein accession | YP_735963 |
Protein GI | 113972170 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCACT GTATTAGAAT ATCGCCATAC TTTGCATCTA GATCAGATTT CGATATGGCC GCTCTAAACC CCTTCATCTT AAGCACCTTA AGTGTCCTTA GCTTAACCTG TGTAAGCAAC GGCTGGGCGA ATGAAAACTT AGTGCAAACC GAAGGCGTAA GTAGCGGCGT ATTACCCACA TCGACAGCAG AATGGGCAAT TAACTTAGAT TTAGGCTGGG ACAGCAAGTA TGTTTCGCAA GGGCGTAATA ACTTGGAGCA TGGCGGTATC TATTGGATGA ATGCCAGCGT TGAGTACGGC AACCTGACAA CCTACGCCCT TGTCGGGCGC GGCGATAGTC AGGCTTATAC CGAGTGGAAC ATTGGCCTAG AATACGCATT ACACCTCAGT GAAGATATTG AAGCACATGT GGGCTATCAA CGGATTGAAG GCTATAGCAA TAGCCGCTGT CAAGATAACG AACTGTTTGC CGAGCTGGCT TACAATGCCG TGACCTGGTT GGTGCCTTCG GCGAGTTATG TATATTCCAC CGAGGCGGCA GGCTATTTTA TCGAACTGAG TCTACACAGC TATTGGCAAC TTAGCGAACG CTTCATCCTC GCCCCTTACA TTACCCAAGG GCTTGATTTT AAATATCGAA CAGAAGATCA CAATGGCCGC AATCATCTGC AATTTGGTTT AGAGGCCAAT TATGATCTGG CCGATAATAT GAGTCTCGGT GGCCATATTA GCCACAGCAT AGCTCAGGCG GATATTGAGC AAGAAGCCAC TGCCAATGGC GACTTTAGCT CGCAGGATCA AACCTATGCG GGTATCCACT TCAATATCAG CTTCTAA
|
Protein sequence | MFHCIRISPY FASRSDFDMA ALNPFILSTL SVLSLTCVSN GWANENLVQT EGVSSGVLPT STAEWAINLD LGWDSKYVSQ GRNNLEHGGI YWMNASVEYG NLTTYALVGR GDSQAYTEWN IGLEYALHLS EDIEAHVGYQ RIEGYSNSRC QDNELFAELA YNAVTWLVPS ASYVYSTEAA GYFIELSLHS YWQLSERFIL APYITQGLDF KYRTEDHNGR NHLQFGLEAN YDLADNMSLG GHISHSIAQA DIEQEATANG DFSSQDQTYA GIHFNISF
|
| |