| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3806 |
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| Symbol | |
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| ID | 4254369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4543769 |
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| End bp | 4544563 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638120451 |
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| Product | bioH protein |
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| Protein accession | YP_735926 |
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| Protein GI | 113972133 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.1902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCTG CGACGCCAGC CCATCATACC CAACTGCATA TCGACATCCG AGGCCAAGGG
CCGGATCTGG TCATGCTCCA CGGTTGGGGC GTTAATAGCG CCGTCTTCAC GCCGCTCCAT
GAGCAGCTTT CTGAGTATAG AGTCCACTAT GTCGATCTGC CGGGCTTTGG CTTAAGTCAG
CCAATAACAG GTGGTTTATA CACTTGGGTG GATGCGCTAA TTCACGCCTT ACCCGCCAAT
GCGATTTGGG CCGGCTGGTC ACTGGGTGGC TTAGTGGCAA CTCAAGCTGC CATAAGCTAT
CCATCCCATG TCAGAGGATT AATGACCATC GCCTCCTCGC CCTGTTTTAT GGCAAGGGAG
GAAGAAGCAT GGCCCGGTAT TCCACCGCAG GTGCTCAGCA TGTTTGGCGA GCAGCTTGGG
CAAAATTTAC CAAAAACAAT TGAGCGCTTT TTAGCGATTC AGGCCATGGG CAGCGAAACC
GCTAAAGACG ATATCAAGCA GCTGCGGGAT TTAGTGCTAG CGCGCCCGCT ACCCGATGCT
GCGGCCTTAA CTCAAGGTTT GGATATGTTG AACCAAATCG ATCTTAGGCC GTATCTCTCG
GCGATACAGC AACCTTGGCT GCGGATCTGG GGCCGACTCG ATGGACTCGT GCCCAAACGC
GTTCAACCTC AAATGCCCAC CGCCAGTCAC ATCACTGATG TCATGCTTGC CAAGGCATCC
CACGCACCGT TTGTGTCCCA CAGGGAAGAA TTCTTGCAGG CAATCACACC TTGGCTGGCG
CAATTCAAGG ACTAG
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| Protein sequence | MNSATPAHHT QLHIDIRGQG PDLVMLHGWG VNSAVFTPLH EQLSEYRVHY VDLPGFGLSQ
PITGGLYTWV DALIHALPAN AIWAGWSLGG LVATQAAISY PSHVRGLMTI ASSPCFMARE
EEAWPGIPPQ VLSMFGEQLG QNLPKTIERF LAIQAMGSET AKDDIKQLRD LVLARPLPDA
AALTQGLDML NQIDLRPYLS AIQQPWLRIW GRLDGLVPKR VQPQMPTASH ITDVMLAKAS
HAPFVSHREE FLQAITPWLA QFKD
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