Gene Shewmr4_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3796 
Symbol 
ID4254359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4533475 
End bp4534386 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID638120441 
Producthypothetical protein 
Protein accessionYP_735916 
Protein GI113972123 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACA GTAACAGCAG TACTAAAACA CACTTAAAAA TGAACGGGAT GTTCATACGC 
TATCCTTATG TTTTGCTGAC CAAATTAATG GGGTTGCCAA GATATATTTG GCTGCATAGG
GCAATGTTGT TACTGCTGAT ATTGACTGTG GTGGTATTTG TGATTTTGGT CAAGCTGGGT
TTGTGGCAAA TGGATAGGGC CGCGGAAAAA ACCGAACTAC TCGCACAAAT GGAGGCCAGA
CAATCCGCTG CCGCACTCAA TCCTGAGCAG CTGATAGCTG AATTGGCTAA AGGTGGCGTT
ACTGGCTATC GCCTTGAAGT TCAAGCCAGC CCCGTTAATC CACAAATCTG GTTACTCGAC
AATCAGGTCT ATCAAGGGCA AGTGGGCTAT CTCGCCTTTC AATTACTGCA AATAACGTCA
GAAAATCAGA CAAATCATCG CGAACAACCT TGGCTGTTAC TCGAACTCGG CTTTATTGCC
GCTAAATCCC ACCGAGATGC CTTGCCCGAA GTCAGCCCCA TAGTCGGTGA ACTGCCTCTT
ACAGGCCGCC TCTATCAAAA ACAGATTAAT CCCTTGAGCC ATCATTTATT AGCAGAACCC
TTCACCACGG AGCAAGGTGA ACGGATTCGG TTTCAAAATC TCAATCTGCC CGAGATGGCA
CAAATGTTAG GACATCCCAT CCTGCCCGCG GTGTTACAAC CCGATGCCTT GCCCCAATTA
CAACCCGCGC AGGCCTTACC CCACCCTTGG CAGCCTTTCC CGCTTTCGGC CCAAAAACAT
TGGGGTTATG CGTTGCAATG GTTTGCCATG GCAACTGTGT TTGCGGGGCT GATGGGCTGG
CAAGCAATGA AATACCTCAA AAAATCACGA CAACGGCATC AAGCCGATAA GGAAGCGACT
AAAACCGAGT AA
 
Protein sequence
MINSNSSTKT HLKMNGMFIR YPYVLLTKLM GLPRYIWLHR AMLLLLILTV VVFVILVKLG 
LWQMDRAAEK TELLAQMEAR QSAAALNPEQ LIAELAKGGV TGYRLEVQAS PVNPQIWLLD
NQVYQGQVGY LAFQLLQITS ENQTNHREQP WLLLELGFIA AKSHRDALPE VSPIVGELPL
TGRLYQKQIN PLSHHLLAEP FTTEQGERIR FQNLNLPEMA QMLGHPILPA VLQPDALPQL
QPAQALPHPW QPFPLSAQKH WGYALQWFAM ATVFAGLMGW QAMKYLKKSR QRHQADKEAT
KTE