Gene Shewmr4_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3779 
Symbol 
ID4254342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4512588 
End bp4513043 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content42% 
IMG OID638120424 
Producthypothetical protein 
Protein accessionYP_735899 
Protein GI113972106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.822352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA CTTTAATTAA CAAAACCTTA GTTGGCGCGA CTTTAATCAT GAGCACTCTG 
GCGATTAGCA TGACGGCTAA CGCAGCAACC CTAAAAGGTA CAGAAACACT CAATGTTGTC
AGCATTAATG GTCAAGCCAC TAAAGCGTTT AAACCCGTTG AACTGCCCGA AGGTAAAGTA
CTGGTTGAAG TTAAATATCA AGATGTATTC AACTACCGTG CGGACGACAG CGGCACTTGG
GTGAAGTCAG AACCTTTATT CTTTACCTTA GATGTTGCAT CTCAGTCTAA TTACCAAATT
AGCACGCCTA AATTAGTCAG TGAGGCGGAT GCGAGACGTT TTATTAAAAA TCCCAGCATT
CAATTAAGTG TGGATAATGC GACGCCACAG CCACAGCCAT TGCAAAACCA CAGCCAATTA
ATGGCGGATA TGTTGGAAAA CCATCCCTCA AAATAA
 
Protein sequence
MKTTLINKTL VGATLIMSTL AISMTANAAT LKGTETLNVV SINGQATKAF KPVELPEGKV 
LVEVKYQDVF NYRADDSGTW VKSEPLFFTL DVASQSNYQI STPKLVSEAD ARRFIKNPSI
QLSVDNATPQ PQPLQNHSQL MADMLENHPS K