| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3729 |
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| Symbol | |
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| ID | 4254292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4459387 |
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| End bp | 4460316 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120374 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_735849 |
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| Protein GI | 113972056 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.51289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTTAATA TCAACCGCTT TTTTCCGCTA TTTGCCTTAC TTGGGACGGG TACGGCGTAT
TTGATGCCCG CATGGTTTAG CGGATTGAAA ACCAGCATAG TGCCGTTGCT GGTGGTGATT
ATGTTATCCA TGGGATTGAC CTTAGATGTG CGGGATTTTG CCAATGCATT CAAACAGAAA
CGTGCCGTTA TCACAGGCTT AATCTTGCAA TTTACTCTGA TGCCCTTAAG CGCCTTAGCC
ATTAGTTTGC TATTAGGACT CAATCGGGAA TTGACCATAG GCATGGTGCT GGTGGGGAGT
GTGGCGGGTG GTACGGCATC GAACGTGATT TGCTATTTGG CCAAGGGCGA TGTCGCCTTA
TCTATCACTA TGACTGCGCT ATCGACCTTA GCGGGTGTGG TACTCACACC CTTGATTATT
GAGCTATTAA TCGGTGAGAT GGTCGCTATT CCTTTAATGG ATATGCTAGT CAGCCTCGTT
AAAATCGTGC TTGTCCCTGT GACTGTGGGT GTGGTGTTGA ATCACTTCTT TAAACCGCAG
GTGGCTAAAC TAGCCCCTGC ATTGCCCATC ATTTCTATCG TGGCGATTGT ACTGGCCATC
TGCATTATTG TGGCCCTAAA TGCAGGGCAA TTTTCGCAGG TGGGGCCTGT GATTTTACTC
GCGGTGTTTC TACATAATGG TGTGGGACTC GCCTTGGGTT ATACCTGCTG CCGCTTGCTC
GGCTTTAACC ATACAGTGTG TAAAACCATT TCGATTGAGG TAGGGCTGCA AAACTCAGGC
CTTGCGACCG CATTATGCAT CAAGTTTTTT AGCCCGCTCT CCGCTGTCCC TAGCGCAATT
TTCTCGATCT GGCATAACCT TTCAGGCGCC CTGCTGGCAG GATATTGGGC GAGCTTAGAG
CAGAAGAAAC AGAGCGAGGA AGTTGAGTAA
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| Protein sequence | MVNINRFFPL FALLGTGTAY LMPAWFSGLK TSIVPLLVVI MLSMGLTLDV RDFANAFKQK
RAVITGLILQ FTLMPLSALA ISLLLGLNRE LTIGMVLVGS VAGGTASNVI CYLAKGDVAL
SITMTALSTL AGVVLTPLII ELLIGEMVAI PLMDMLVSLV KIVLVPVTVG VVLNHFFKPQ
VAKLAPALPI ISIVAIVLAI CIIVALNAGQ FSQVGPVILL AVFLHNGVGL ALGYTCCRLL
GFNHTVCKTI SIEVGLQNSG LATALCIKFF SPLSAVPSAI FSIWHNLSGA LLAGYWASLE
QKKQSEEVE
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