Gene Shewmr4_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3708 
Symbol 
ID4254271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4425654 
End bp4426436 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content53% 
IMG OID638120350 
Productacetylglutamate kinase 
Protein accessionYP_735828 
Protein GI113972035 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCA ACAACTCAGT ATTAGTTCTT AAAGTCGGCG GCGCCCTGCT GCAGTGTGAA 
ATGGGGATGG CGCGTTTAAT GGATACCGCG GCAGCAATGA TCGCTGATGG TCAGCAAGTG
CTGATGGTGC ATGGCGGCGG CTGTTTGGTC GATGAGCAAT TAGCCGCAAA CGGCATGGAA
ACCGTCAAGT TAGAAGGCCT GCGGGTGACC CCGCCGGAGC AAATGCCGAT CATTGCCGGT
GCACTGGCCG GAACATCAAA CAAGATCCTC CAAGGCGCGG CGACAAAGGC TGGGATTGTG
AGTGTGGGCA TGAGCTTAGC CGATGGCAAC ACAGTATCGG CCAAGATCAA AGATGAGCGT
TTAGGGTTAG TGGGCGAGGT TTCTCCTAAA GACGCCACTT ACCTCAAGTT TATTCTGTCC
CAAGGTTGGA TGCCGATTTG TAGCTCAATT GCCATGATGG ACGATGGTCA AATGCTGAAC
GTGAACGCCG ACCAAGCGGC GACGGTATTA GCTAAGTTGG TCGGTGGCAA GTTGGTGCTG
CTATCGGATG TGTCTGGCGT GCTCGATGGT AAAGGTCAAT TAATCCCTTC GCTGAATGGT
AAGCAGATTG CCGAGTTGGT GAAGCAAGGC GTGATCGAAA AGGGAATGAA AGTCAAAGTA
GAAGCTGCGC TCGAAGTGGC GCAGTGGATG GGGCAGGCGG TTCAAGTTGC CTCATGGCGT
GATGCAAGCC AATTAGTCGC ATTAGCAAAA GGTGAGGCCG TGGGCACACA AATCCAACCA
TAA
 
Protein sequence
MSTNNSVLVL KVGGALLQCE MGMARLMDTA AAMIADGQQV LMVHGGGCLV DEQLAANGME 
TVKLEGLRVT PPEQMPIIAG ALAGTSNKIL QGAATKAGIV SVGMSLADGN TVSAKIKDER
LGLVGEVSPK DATYLKFILS QGWMPICSSI AMMDDGQMLN VNADQAATVL AKLVGGKLVL
LSDVSGVLDG KGQLIPSLNG KQIAELVKQG VIEKGMKVKV EAALEVAQWM GQAVQVASWR
DASQLVALAK GEAVGTQIQP