| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3689 |
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| Symbol | |
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| ID | 4254252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4406013 |
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| End bp | 4406885 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120331 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_735809 |
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| Protein GI | 113972016 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGC TTCCTCCATT ACGCGCACTA CAAGTCTTTG AGACCGCCGC AAGGCAACAG
CATTTTTCCA AGGCTGCCGC CGAGCTTTGC ATTACCCAAA GCGCAGTTTC ACACCAAGTG
CGTGTATTAG AGGAATATTT TGGCGAGCAG CTTTTCGACC GTCAGGGACG AAAATTGCAA
CTCACGCCTA AAGGCCAGAG CTTGTTTATT GAGTTAGAAA GGATCTTTAA TGAGTTAAGC
GATCTTAATC TCAAGATCCG CGACACCCCA AACCAACAAC TCTGTTTGGC GGTGTATAGC
TCTTTTGCGG TGAAATGGTT GATCCCAAGA TTAGCGGATT TTAGGCGTCA GTATCCCAGC
GTTAAAATTC GTCTCGAGAT GATCACTCAA GACCCCGATC TCAGCACTAG CACGGCCGAT
ATCTTTATCG CGGGCAAACT CAATCAGCGC GGCTATTGGC AACAGTTACT ACATAAGGAG
CGGCTCATCC CAGTATGTAG CCCGAGTTTT TACCCCAAGT GGCGTGATAT TAACTTAAGC
AATTTCCAAC AACAGGCACT GCTGATTGTG GATGAGGGGC CGCTGGGACT CGATTGGCAT
AAATGGTCAT CGGCCCACCA GATCCCACTG AATAACGAGC AACAACATAT TTTTAGCCAT
ATCGTAATGG CAATTGAGGC GGCAATTGCG GGCCAAGGCC TCGCCCTCGC CCCCGATTTT
ATGGTGGCAG GTGATATCAG CACTGGCAGG CTGGTTGCGG TTAATCTGCC AGATGTTCAT
ACGGGCTTTG AGTTTAGTTT TATCTGTAAG CAGCGCCGTC TCACAGAGCC TGCCATCGCC
GCCTTTTCCT CTTGGCTAAA ATCGCAGGCC TAA
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| Protein sequence | MRKLPPLRAL QVFETAARQQ HFSKAAAELC ITQSAVSHQV RVLEEYFGEQ LFDRQGRKLQ
LTPKGQSLFI ELERIFNELS DLNLKIRDTP NQQLCLAVYS SFAVKWLIPR LADFRRQYPS
VKIRLEMITQ DPDLSTSTAD IFIAGKLNQR GYWQQLLHKE RLIPVCSPSF YPKWRDINLS
NFQQQALLIV DEGPLGLDWH KWSSAHQIPL NNEQQHIFSH IVMAIEAAIA GQGLALAPDF
MVAGDISTGR LVAVNLPDVH TGFEFSFICK QRRLTEPAIA AFSSWLKSQA
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