| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3663 |
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| Symbol | |
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| ID | 4254227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4373462 |
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| End bp | 4374508 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120306 |
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| Product | porin |
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| Protein accession | YP_735784 |
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| Protein GI | 113971991 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA CCTCGCTACT GCTACTCGGC CTCACGCTGC CTTTTGGCAC TATGGCCGCA
GAAAATAGTG ATTGGGAACA ACTCGATCGC CGCCTACAAC ACTTAGAACA GCAACAAACA
ACTCAACTGC AAAATACTGA ACTTAGCCTC TACGGCTCTG TGAGACCCAC ACTGGTCTAT
AGCGATAGTA GTTTGACCGA CGACTGGGAT GTCGGAGATG CACTCTCACG TATAGGAATT
AAGGGTAAAA CTGAATTCGC CCCCGGCTGG GCACTGCTGG CACAAGGTGA ATGGAAAATA
AACCTGAACG GTGATGGTAG CTTTGGTGAT GCACGCTTAG CTTTTGCGGG CGTAAGCTCT
CCTTGGGGAC AATTCACTCT CGGCCGTCAA CGCCCCGTAC AATATAGCCT AGTCGCCGAA
TATACCGACA TCTTCAATAA TGCCAACTCG CCTTTCGCCT ACAATCAGGA GAGTCCTTTT
TTTACGGATA ATCTCGCGCT TTATCAAGCC AAAATCGGCT ATTTTACCCT TATGGGATCA
GCGCAATTTA AGAGCAAAGA GGCCAACAGT GGCGCAGATA TGCTGAATGC TGGGATTGGC
TTCGACTGGC AACAGTTACA CCTAGGGCTA AGTTACCTAG AACAGGATAC TTTCGAGTCC
AATCTTAATA CTGGCAAAGA AAATACTACT GGTTTTGCAA TGGCTTATAG CTTTACCAAT
GGTGTCTATC TTGCAGTTGC CTATCAATAT AAGGACTACC AACTCAATCA AGGCGAAGAC
AGAGAGGGCT ATAGTCTCGA TAGTGCACTC GCCCTTCCAC TCGGTCCGGA CTACAAGCTT
AAGCTGGGTT ACTTCCAATT CGACGATGGG GTAAGCGACC CAAGCAGTCT TAACTATCAA
GGTGTTAATA CCACAATAGA GTGGAATCCC ACCCCCAATG TGCGCCTGCA TGCAGAGTAC
TTATATCAAG ACAATGACAA CCGAGATACA GATAACAGTA TCGCCATCGG GGTTCGCTAT
GACTTCGATT TAAACTGGAA AGCTTAA
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| Protein sequence | MNKTSLLLLG LTLPFGTMAA ENSDWEQLDR RLQHLEQQQT TQLQNTELSL YGSVRPTLVY
SDSSLTDDWD VGDALSRIGI KGKTEFAPGW ALLAQGEWKI NLNGDGSFGD ARLAFAGVSS
PWGQFTLGRQ RPVQYSLVAE YTDIFNNANS PFAYNQESPF FTDNLALYQA KIGYFTLMGS
AQFKSKEANS GADMLNAGIG FDWQQLHLGL SYLEQDTFES NLNTGKENTT GFAMAYSFTN
GVYLAVAYQY KDYQLNQGED REGYSLDSAL ALPLGPDYKL KLGYFQFDDG VSDPSSLNYQ
GVNTTIEWNP TPNVRLHAEY LYQDNDNRDT DNSIAIGVRY DFDLNWKA
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