| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3527 |
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| Symbol | |
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| ID | 4254092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4215852 |
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| End bp | 4216562 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120164 |
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| Product | C factor cell-cell signaling protein |
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| Protein accession | YP_735649 |
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| Protein GI | 113971856 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT TAGTGTTAGG CGGTAGCGGT GGCATAGGCC ACGCTATGGT GAATAAGCTG
CGCGAAATCT ATCCCGAGGC CACTATCCAT ACGACCTATA AACATCATAG GCCCGATACA
GGGCGAGACG ATGGCGTGAT TTGGCATCAA CTGGATATCA CCCTTGAGGA GGAGATTAAG
CAACTGAGTC AAAACATCTC CCAATTAGAT TGGCTAATCA ACTGTATTGG CATGCTGCAC
ACAGAGGATA AGGGGCCAGA AAAAAGCCTG CAGGCACTCG ATGGGGATTT TTTCCTGCAC
AATATCCAGC TCAATACGCT GCCGAGTATG ATGCTGGCAA AGCACTTTGA ACCCACGTTA
AAACGCAGTG CGTCGGCAAG GTTTGCCGTG GTATCGGCCA AAGTCGGCAG CATTAGCGAT
AACAGATTAG GTGGTTGGTA CAGCTATCGC GCCTCGAAAG CGGCGCTGAA TATGTTCCTT
AAAACGCTGT CGATTGAATG GCAGAGAAGC ATGAAACACT GCGTGGTGCT AGCACTGCAT
CCCGGCACTA CGGATACGCC ATTATCCAAA CCTTTTCAGC AGAACGTGCC TAAACAAAAG
CTGTTTACAC CAGAGTATGT CGCCCAATGT TTAGTCAGTA TTATCGCCAA TGCCACACCA
GCACAAACGG GCAGCTTTTT GGCCTACGAT GGTGCTGAGC TGCCTTGGTA G
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| Protein sequence | MNILVLGGSG GIGHAMVNKL REIYPEATIH TTYKHHRPDT GRDDGVIWHQ LDITLEEEIK
QLSQNISQLD WLINCIGMLH TEDKGPEKSL QALDGDFFLH NIQLNTLPSM MLAKHFEPTL
KRSASARFAV VSAKVGSISD NRLGGWYSYR ASKAALNMFL KTLSIEWQRS MKHCVVLALH
PGTTDTPLSK PFQQNVPKQK LFTPEYVAQC LVSIIANATP AQTGSFLAYD GAELPW
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