| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3510 |
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| Symbol | |
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| ID | 4254076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4195632 |
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| End bp | 4197170 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120148 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_735633 |
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| Protein GI | 113971840 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.765295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTGA TACTTATCAT TATAGCCTTT GTCGTTCTGT TTATTTTTTT TGCCAAATAC
CAAAAAAAGA AAATACAAGC CGAAGCGCTT GCCGCGGGTG AGCCCTCGGC GCTACTCAAT
CACGGACTCA CATTAATCAA TCAGGGCAAA ATCAACTCAG GCCTAGACTA TATTCAGCAG
GCCGTAGATA AAGGCTTTGC CGTGGCCGCC ATTGCTATGG CCGAGTTGTA TTCGGGTCGA
TTCCAACAAG TCCCCGCCGA TCCCAAGGCA TCTGAATATT GGTATCGCAA AGCCGCCGAG
ATCGATCCGC AATTTTTACC CATGATCACC CTAACTAGCT TGGTCGCCTC TGAGGCGCAA
ACACCCGAGC AGTTACGCGA ACAGGTAGAA CAACTCAAAG CCAGTGCTGA AGCGGGGCAA
GTCGAGTTTC AATATGAGCT CGCCTATTTG TATCTCAGAC AACCCTTTCT CGATCCCGAT
GCAAGCCAAG CAATTTACTG GTTCGAAAAG GCTGCCGCCC AAGGAAACCA AGATGCCTAT
TACCACTTAG GTACACTCTA CTGGCACGAT GAACGTGTCA CGCCCGACTA TAGCAAAGCG
CGGGAATACT TTGAGAAAGC CGTCGCCGCC GGTGATGAAC TCGCAAAAGA TAACCTAGGC
CATATGCTGG CCGCAGGCCA AGGCGGCCCT AAGGATCTCG TCCGTGCCGA AGCCCTACTC
AGCGAATATG CCGTAGAAAA TGATTTTCGC CAGTATTACC TAGGCAAACG TTTCCTCTAT
GGTGAAGATT TTGCCGTCGA CTACGGTAAA GCCCGCCACT GGTTAGAAAA ATCCTGCACC
GCTGACAATG TTTTTGCCAA GTTAGCGCTG GCACACCTTA AACTACTCGA CCCACAAACG
GATAATGACT ACCAGCAGGC AAGAACAGAA TTCGAGACGC TAGCGTCCCA GTGGCAAGAA
GAAGCCCTAT TCGGCCTAGG TAAAATCTAT GAAGAAGGCT TAGGCGTCTC GCGCCAACCG
ATTAAAGCCT TAATGTATTA CCAACTGGCG GCTATGAGCC ATATCAGTGA CTATCAAGAC
GCATATGAGA AGCTCAGTAA GCGCTTAGGT ACCCTAGAGA TCCGCGAAGC CCAAAGCCTG
TGTAATAACT TTCTGCATCA ACATCCTATC CCCAATGAGC AGCAAGCTTA TTACTACCTT
AACCAAGCAG AAATCTACCG CAAGGGTGAG CATCCGAGCC GCGAAGCGTT GCAAACCGCA
GAGACTTGGT ACCGTAAAGC TGCCGACTTG GGCAGCCAAG ATGGTATGCA AGCCCTCGTT
GATATCAACC GCCATGAGTC GATTGATAAA CCGGTTCAGA CATATATTTG GTCGAGCATA
TTACTGCGCA ACTTTGGCAA ATACGGGATG AATAGCGATC AGCTTTTGTA TCAACAACAA
GTCCTGCCGC GCTTAACAGA GTCCGAGTTG TTGTATGCCC AAGATGAAAT CGAGAGAATT
GAAGTCCAAC TAGCGCCTTA CTTACAGAGC AACGAATAA
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| Protein sequence | MLLILIIIAF VVLFIFFAKY QKKKIQAEAL AAGEPSALLN HGLTLINQGK INSGLDYIQQ
AVDKGFAVAA IAMAELYSGR FQQVPADPKA SEYWYRKAAE IDPQFLPMIT LTSLVASEAQ
TPEQLREQVE QLKASAEAGQ VEFQYELAYL YLRQPFLDPD ASQAIYWFEK AAAQGNQDAY
YHLGTLYWHD ERVTPDYSKA REYFEKAVAA GDELAKDNLG HMLAAGQGGP KDLVRAEALL
SEYAVENDFR QYYLGKRFLY GEDFAVDYGK ARHWLEKSCT ADNVFAKLAL AHLKLLDPQT
DNDYQQARTE FETLASQWQE EALFGLGKIY EEGLGVSRQP IKALMYYQLA AMSHISDYQD
AYEKLSKRLG TLEIREAQSL CNNFLHQHPI PNEQQAYYYL NQAEIYRKGE HPSREALQTA
ETWYRKAADL GSQDGMQALV DINRHESIDK PVQTYIWSSI LLRNFGKYGM NSDQLLYQQQ
VLPRLTESEL LYAQDEIERI EVQLAPYLQS NE
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