| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3499 |
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| Symbol | |
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| ID | 4254065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4185502 |
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| End bp | 4186347 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120137 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_735622 |
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| Protein GI | 113971829 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGC TATCAAGCTT AATTCAACAT GCGGCGCCGA AAGCCAGCCT ATTTTTCTCG
GGCAATCTTT GCCAAAGTGC AGAGAGTGAG GAGCACGCGA ATGGTGGGCA GCTCCACTTA
TTACGCCGGG GTGAATTGGG GCTACATCAA ACCGGCAGCG CAGTACAAAC TATCAGTGAA
CCCACACTCA TCGTTTACCC TCGCGGTCGC CATCATAGAC TTCAGCCTCT GCATTTCAGC
GGTTGTGATT TGGTCTGTGC TCGCTTAACT TTTCGAGATT CTCCACTATT TCGTGCGTTA
CCTGACGCCT TAATCATTCC CTTAACCAAG CTTGAAGGGC TGGCTCCAAC CATCAATTTA
CTTTTTGATG AAGCCTTTTC CCTGCGCTAT GCCCATAATG CCGTTGTCGC TAGTTTGTTG
GATTTACTCT TACTGCTACT TTTGCGTCAT ATGGTCGAAC ACAATTTGTG TGAGTCGGGC
TTACTTGCGG CCATGACGGA TCCCAAACTC GCCAAAGCTA TTGAGGCTAT CCATGCTAGC
CCAGATACGC CGTGGACCAT TGCAGAATTA GCCAAGCTCG CAGGAATGTC GAGGGCGCAG
TTTGCCGCTC GCTTTCATCA AGTGATCGGT CAGCCACCGC TAAGCTACGT GACTGAGTCA
CGTTTATTAC TTGCACAGCA GCTATTGTTG GCGGGTCAGC CAGTTAAATT TATTGCGTTA
GAAGTGGGAT ACAGCGGTGG CGTTGCTTTT TCTCGTGCTT TTGAGCGTCA GTTTGGTTTG
ACGCCGACAC GCTGGTTACA ACAACAGAAA AGCATGGGGA CGGAGGCAAT TGAACCAACA
AAGTAA
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| Protein sequence | MDALSSLIQH AAPKASLFFS GNLCQSAESE EHANGGQLHL LRRGELGLHQ TGSAVQTISE
PTLIVYPRGR HHRLQPLHFS GCDLVCARLT FRDSPLFRAL PDALIIPLTK LEGLAPTINL
LFDEAFSLRY AHNAVVASLL DLLLLLLLRH MVEHNLCESG LLAAMTDPKL AKAIEAIHAS
PDTPWTIAEL AKLAGMSRAQ FAARFHQVIG QPPLSYVTES RLLLAQQLLL AGQPVKFIAL
EVGYSGGVAF SRAFERQFGL TPTRWLQQQK SMGTEAIEPT K
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