| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3485 |
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| Symbol | |
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| ID | 4254051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4168936 |
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| End bp | 4169868 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120123 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_735608 |
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| Protein GI | 113971815 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.607813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTGA AGCACTTTGG ACTCAGTCAA ACGCCATTTT CGTTAACACC TAATACCGGA
TTTTTTTTCG GGTTATCCCC GCACGTAGAG GCGCTGCAAG TATTGCAGAC CGCCCTACAA
ACCGGGGAGG GTTTTATCAA AGTCACTGGC GAAGTGGGCA CGGGCAAAAC CTTAATCTGC
CGTAAGTTGA TTAATGAGCT GCCGCAGGGC TTCCATTGTG CATATCTTCC TAATCCTTAT
CTCACCCCCG CCGAGCTGCG CTGGGCGGTG GCCAATGAAC TTGGATTAAA ATACACCAGC
GAAATCGATC AGCAGCAACT CACCGGGCTT ATCCAGCAGC AATTACTTGC TCTGAGTGCC
CATGGTCACG CCATCGTATT AGTGCTGGAT GAAGCGCAGG CCTTGCCCGA TGAGAGCCTC
GAAGCGCTGC GACTGTTTAC CAATCTTGAA ACTGAAAGCC GTAAGCTGCT GCAAGTGGTG
CTCTTTGGTC AGCCCGAATT GGATGAGCGA TTAAAGCGCC AAGCCTTTAG ACAATTGCGG
CAACGCATCA CCTTTAGCTA CAGTCTGCGG CCGTTAACCT GGGATGAAAC CGATGCCTAC
ATCCGTTACC GCTTAGCGGT GGCAGGTTAT GCGGGACAAG CCTTATTTGG CCCTAAACTC
ACCCGTAAGA TCGCCGAGGC ATCTCGTGGG ATCCCAAGAT TGATCAACAT TTTAGCCCAT
AAAGCCCTGA TGCTCAGTTT TGGCGAAGGG GCAACTCAGG TGCAGATGTC CCACATTAAG
GGCGCAATAC AGGATACCGA AGATGCCAGT CGATCAGTTT TACCCAAATG GCCGACCTAT
ATGGCGATCG CACTGATAGC ATGTGCAGCA GCTATTGGGG CATTACTGGC ATCGGGCGTT
AACCTGCAAC AATTGTGGGG AGGCGTTGCA TGA
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| Protein sequence | MYLKHFGLSQ TPFSLTPNTG FFFGLSPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLIC
RKLINELPQG FHCAYLPNPY LTPAELRWAV ANELGLKYTS EIDQQQLTGL IQQQLLALSA
HGHAIVLVLD EAQALPDESL EALRLFTNLE TESRKLLQVV LFGQPELDER LKRQAFRQLR
QRITFSYSLR PLTWDETDAY IRYRLAVAGY AGQALFGPKL TRKIAEASRG IPRLINILAH
KALMLSFGEG ATQVQMSHIK GAIQDTEDAS RSVLPKWPTY MAIALIACAA AIGALLASGV
NLQQLWGGVA
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