| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3417 |
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| Symbol | |
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| ID | 4253983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4083745 |
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| End bp | 4086519 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120055 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_735540 |
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| Protein GI | 113971747 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCCT TACCCTTAAG AGCGGTTGAA GCGCCTTTAT GGCCTGAGTT GGCCAATTTA
CCCTTAAGTC AACGCGTGCA CACAGGCACT CTTACCAATG GTATGCACTA TCTGTTAGTG
AACAACAAAA CTCCCGAACA GGCGGTTATC GTCCGTATGC GGGTCGATGT GGGATCTGTG
ATGGAAACGG ATGCTGAGCA AGGGCTGGTG CATTTGTTAG AGCATATGGC CTTTAGTGGT
TCTACTGGGC TAGCTGCGGG GGAGATGATC CCCACACTGC AGCGCCTAGG CTTAAGTTTT
GGGGCCGATA CCAATGCGGT GACTGAATTT CAGCAGACGG TTTATCAGTT TAATCTACCG
AGCAATAGCC AAGATAAGGT CGATACCGCC TTGTTTTTAA TGCGCGAAAT CGCCGGTAAT
CTGTTGCTGG ATCCCGCGTT TATCGAGCGT GAAAAGGCGG TGGTTTTGTC TGAATTGCGT
GAGCGAAGCA GCGCCGATTT AGAAAACTAT CGCCACCAGT TAGCCTTTTT AATGCCGCAA
ACAGTGCTGT CGCAGCGCTT TCCCGTAGGA GAGGCGACGA GCATTAAAAA TGCGAACCGT
GAAAAGTTAT TATCCCTCTA TCAACGTTTT TACACGCCGT CCCGCACCAC CTTAATTGTG
GTGGGCGATA TCGATGTCGG CAGTATCGAG CAAAAGATCA AACAGCAATT TACCGATTGG
CAAGCCGCGC CGCAGGCTGC TGGGGTAAAG GCGCAATCTA TCGGTATGGT GCAAGCCAAG
GCTGCGGTAG AGGCGAGCGC CTTCTTCGAT CCGAGTCTGC AAACCTCGGT TTCCTTAGGA
CTGTTAAAAC CACAAACGCC TAAGCCTGAT ACGATTGCGC TGCGCGAGCA GGATATTTTA
TTAGAGCTCG CCCACGGTAT TTTGTATCGC CGCCTAGAAT CTCAATTACT CCACAGCCAA
GGCCTGTACG GCGTTAATCT GCAAATTGGT CACGAGTATG ATATTGCCTA CGGTACTCAA
ATGACGCTCG GCACGCAGGA AAACAATTGG CAGCAGGGTA TTGCGTTATT GGAGCAAACC
CTGCGTCAGG CGCTTGAGTT TGGCTTTAGC CAACAGGAAA TCGACCAACA ACTTAAACGA
ATGCATAAGG GCTATCAGCT CAATGCTGCC GGTAGCAACA CTATCCACAG CCTGAACATT
GCCGAAAGCC TAGTGAATGC GGTGGCGAGC AGACGTGTGC CCGTCGAGCC TGAGTGGCAA
TTGGCATTGT TTGAGAAACT GATGCCGAGT ATCACGCCGC AAAAACTGCA GCAGTTGTTT
AAACAGACTT GGAATGGCAC GCCTTATTTG TATTTAACCA GCAATAAGCC CATAGATGAT
GTTGAAAAAC AGCTATTATC CGCCTACAAC GCGAGCCAAA AGCAAGCGGT AAAAGCGCCT
GAAACCAAAG CCATTGCCGA ATTTGCCTAT AGCCAGTTTG GTGAGCCTGG TCAGATTGTT
GCCGATCAGC GTGATGCCGC AACTGGGATC CGTAAGTTAC AGTTTGCCAA CGGTGTGCGA
CTCAATTTAA AACCCACGGA TTTTAATCAG GGCGTAACGC TGGTGAGTTT AAACATCGGC
TTTGGCGAGG TGCCATTCCC CGAGCTAGAC GGCTTGTCCT ATCTATTTAA CAGTGCCTTT
GTGCAAGGCG GCTTAGGCTT ACATGATTGG GATAGCTTGC GGGATATTTT TGCAGGCCAA
GATATCTCTG TGAGCTTGAG TCTACGTGAG CAGAGTTTTG GCGGTGAGAT CAGCACCAAT
GCTGCCGAGC TTCGTACCCA ATTAGGCGTG CTGACGGCTT ATTTAGTCGA CCCAGGTATG
GAGAAGCAGG CCGAGCAGTT ATTCCGTGAG CAAGTGATTG CCGAGCAGCA GAGTATTCAT
AGCAATCCAC AGCTGGAGTT TTCGAATCAA TTTGCTCGGA TTGCCCATGA TGGTGATAAA
CGCTATGGCT ATGGTAATCC TGAGGAAATC CTCAAGCGTC AGTTTACCGA GTTAGCGCCT
AGTTTCCATT CTGCGGTGCA GCAGGGGGCG ATTGAACTGG CGATTGTCGG CGATTTTAAT
GAAGACAACG CCATTGCCGA AGTGGCGCAA ACCATAGGGG CTGTTGCTCG TCAGCCGATC
CCTAAGGGAC AGACAATTGT GCCCGTGTTT CCCAAAGTGC CAGCACACAT GAGCCTGACG
CATTATGGTC AGGTCGATAT GGCGGCGCTG GCGCAGGTGT GGCCAACCAC GGATATGAGT
AATCTTCGTG AGCAGGTCGG TTTAGGCTTG CTCGAGCAGG TACTGAGCAT CTTGCTGACT
GAAAATGTGC GCGAAAAAGC CGGCGCGAGT TATTCACCTT CGGCATTCTC ATATAATGAT
TTAAATCCAA CGGGTTATGG CTACCTTGGC TTATTTAGCG TCACAACTAA GAGTATGTTG
CCTGAGGTGG CTCAGTATTA CGCCGCCGCA GTGAAGCAAG TCCAAGCGCC AGCGGGGATC
AGTGAGGATT TACTCAATCG TGCCCGCCAG CCAGTGTTGG AGTGGATGCA GATGGCGCCG
CAAAGCAATA ACTTTTGGCT CGATTTAGCC TCAACCGCCC AAAGCCAACC GGATCGTTTT
GCGGGCTTTA ACCAACGATT GGCGCTGGTA CAGCAGATTA CGCCCGCCGA GTTAAGCCAA
TTGGCACTGA AATATCTCAA GGATAATAAG CGTTTAACAA TCGAAACCTT ACCCGCGCCA
GTCACGGCTC AGTGA
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| Protein sequence | MVALPLRAVE APLWPELANL PLSQRVHTGT LTNGMHYLLV NNKTPEQAVI VRMRVDVGSV
METDAEQGLV HLLEHMAFSG STGLAAGEMI PTLQRLGLSF GADTNAVTEF QQTVYQFNLP
SNSQDKVDTA LFLMREIAGN LLLDPAFIER EKAVVLSELR ERSSADLENY RHQLAFLMPQ
TVLSQRFPVG EATSIKNANR EKLLSLYQRF YTPSRTTLIV VGDIDVGSIE QKIKQQFTDW
QAAPQAAGVK AQSIGMVQAK AAVEASAFFD PSLQTSVSLG LLKPQTPKPD TIALREQDIL
LELAHGILYR RLESQLLHSQ GLYGVNLQIG HEYDIAYGTQ MTLGTQENNW QQGIALLEQT
LRQALEFGFS QQEIDQQLKR MHKGYQLNAA GSNTIHSLNI AESLVNAVAS RRVPVEPEWQ
LALFEKLMPS ITPQKLQQLF KQTWNGTPYL YLTSNKPIDD VEKQLLSAYN ASQKQAVKAP
ETKAIAEFAY SQFGEPGQIV ADQRDAATGI RKLQFANGVR LNLKPTDFNQ GVTLVSLNIG
FGEVPFPELD GLSYLFNSAF VQGGLGLHDW DSLRDIFAGQ DISVSLSLRE QSFGGEISTN
AAELRTQLGV LTAYLVDPGM EKQAEQLFRE QVIAEQQSIH SNPQLEFSNQ FARIAHDGDK
RYGYGNPEEI LKRQFTELAP SFHSAVQQGA IELAIVGDFN EDNAIAEVAQ TIGAVARQPI
PKGQTIVPVF PKVPAHMSLT HYGQVDMAAL AQVWPTTDMS NLREQVGLGL LEQVLSILLT
ENVREKAGAS YSPSAFSYND LNPTGYGYLG LFSVTTKSML PEVAQYYAAA VKQVQAPAGI
SEDLLNRARQ PVLEWMQMAP QSNNFWLDLA STAQSQPDRF AGFNQRLALV QQITPAELSQ
LALKYLKDNK RLTIETLPAP VTAQ
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