Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3414 |
Symbol | |
ID | 4253980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4077645 |
End bp | 4079069 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120052 |
Product | MltD domain-containing protein |
Protein accession | YP_735537 |
Protein GI | 113971744 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.387896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGAAAA CCTTTCGCCA CCCCAGTGCA TTCGCTGCGC TCGTGGTCGC CATCTTGACG GCTCAGCTAA GCGGCTGCGC AACCACTTCG GCGCAAACCT CACCCACGGA ATACGCTGCA GCCTTGCCAG AAGCCGAAGG CACTAGCGAA CAGACGACGC AACCTCAGCA TGTTGAGGCA GAAGTTATCG ACGAACGCTA TACCGATGTG TGGGAGAAAA TCCAACACGC CCGTACTATT GATGTGCATG ACGATGCTGA AGTGCGCAAA CAGCGCAACT TTTTCGATGA TAAGCAAAAG TTTATGACTC AGGTGACCCA ACGCGCCGAG CCATTTTTAT ACTATATTGT CAGCCAACTC GAAACCCGTA ATATGCCGCT CGAATTGGCA TTATTACCTA TTGTCGAGAG TGGCTATAAT CCGCTTGCCC AGGCAAATGG GCCTGCTGGA CTCTGGCAAA TGATCCCTGC CACGGGACGT AACTTTGGCC TTACCATCAA CTCAGCCTAC GATGGCCGTA AAGATGCGCT GGCCTCGACC GATGCCGTAC TCGACTATTT ACAGCACTTG CACGACACCT TAGGTAACGA CTGGATCAAC GCCGTTGCAG GCTATAACAG TGGCGAGCTA GTGATCAAAG CCGCTATCGA TAGAAACAAA GCTAAGGGCA AACCCACGGA TTTCTGGTCG CTGAATATTC CGGCTCGCCA AGTGCAAACC GTGCCTAAAT GGCTGGCCTT TATTCAAATT ATCCGCGCAC CTAGCCATTA CAATCTCAAG GTGATGCCGA TTGCCAACCG CCCATTTTTA GAGCGTTTAC CTGCACCTAA CGGCGTTGAA CTCAGCCAAA TCGCCAATGC TGCGGGACTC ACTAAGGCGG AGTTTAAAAC CTATAACCCT GGTTATCGCC AAAGCGTGAT CCCAAGTAAG GGCAAATATC AAATCGCCCT GCCGATTGAA AACATCGGCC AATACCAAGA GAATCAGCAT CAGCTGTCCG CGCAAAAACA TTACGACAGC CAAAGCTATA TTGTGAAATC CGGCGATAGC CTAGGTACAA TTGCTGCGAA ATTTGATATT TCAGTCAAAG AGTTAAAGCA GGCAAATAAC CTCAGCTCCG ATAGAATTAA AATCGGCCAA GAGCTGACCC TGTTAACGCC GATGACAAGC GAAGATAACG CCTCGAGCGA GACGCCAAAA CAGAGCAAAG CTCAAACAAC GTCTCAATCG GCTAAAACTA AAACCAGCAG TAAAACCGCT GACAAGCCCG CCGCGAAAGC CAGCACATAC AAGGTGAAGT CCGGTGACTC GTTAGATAAA ATCGCGCGCA AAAACAAAGT GAAGCTCGCG GATTTAATGA AGTGGAACCA GCTCAATGCC AAGAGCATTA TTAAGCCTGG CCAAGAGCTA AAACTGTCGG AATAG
|
Protein sequence | MRKTFRHPSA FAALVVAILT AQLSGCATTS AQTSPTEYAA ALPEAEGTSE QTTQPQHVEA EVIDERYTDV WEKIQHARTI DVHDDAEVRK QRNFFDDKQK FMTQVTQRAE PFLYYIVSQL ETRNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTINSAY DGRKDALAST DAVLDYLQHL HDTLGNDWIN AVAGYNSGEL VIKAAIDRNK AKGKPTDFWS LNIPARQVQT VPKWLAFIQI IRAPSHYNLK VMPIANRPFL ERLPAPNGVE LSQIANAAGL TKAEFKTYNP GYRQSVIPSK GKYQIALPIE NIGQYQENQH QLSAQKHYDS QSYIVKSGDS LGTIAAKFDI SVKELKQANN LSSDRIKIGQ ELTLLTPMTS EDNASSETPK QSKAQTTSQS AKTKTSSKTA DKPAAKASTY KVKSGDSLDK IARKNKVKLA DLMKWNQLNA KSIIKPGQEL KLSE
|
| |