Gene Shewmr4_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3405 
Symbol 
ID4253971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4065730 
End bp4066053 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content49% 
IMG OID638120043 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_735528 
Protein GI113971735 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.467432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0160634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTC AGTATCTCGT GGTCAGCACT AGCTGCCCTG ATGAAGTTCA AGCCAAACGC 
ATCGCTCGCG CCTTAGTGGA CGCGCGCATC GCCGCTTGCG TGCACATTTC GGCGCCGATC
CGCTCCATTT ATGCATGGGA AGGAAAAATC TGTGAGGAGC AAGAAATTAG CTTACACATT
AAATGTTTAC AAAGCCGCTA TGCCGAGTTA GAACAGCTTG TGCTAAAACT CCACCCTTAT
CAAGTGCCTG AAATTATTGC CGTACCCGTG ACTCACGGGC TACCAGCCTA CTTAGATTGG
ATAAAAGATA ACACTCAGCC ATGA
 
Protein sequence
MQAQYLVVST SCPDEVQAKR IARALVDARI AACVHISAPI RSIYAWEGKI CEEQEISLHI 
KCLQSRYAEL EQLVLKLHPY QVPEIIAVPV THGLPAYLDW IKDNTQP