| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3392 |
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| Symbol | |
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| ID | 4253958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4047142 |
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| End bp | 4047987 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638120030 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_735515 |
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| Protein GI | 113971722 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0913399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAA ATTTAGTGCG CACCTTTTTA GTCGTGGCCG AATGCCAGTC CTACACTAAA
GCCGCTGAAC ATTTACAATT AACGCAACCC GCAATCAGTG CCGCAATTAA ACGCTTAGAA
AATCGCTATG GCGAAAACCT TTTTATCAAG CAGGGCCGAG GAATAGAACT CTCCAGTAAA
GGGCAACAAC TGATCCCCGC ATTTCGCCAA GCACTCAGCA TCATCGAAAA TGCAATGAAT
ATGCGTACCC AATTTAATGT TTGCTGCAAT GAATCGCTGA TGAGTACTTT ATTTTCGATT
GATAACATTA GCTTGCAAGA ATCTCCCCCA GAGAAGGACC AACTGTTTGA GCACCTGCGT
CAAGAGAAAA TCGACATCAT AGTCGACAGC ATTAGGACCA GAGACAGTGC ATTTATGGTG
GAGGAAATTT ACTTAGAACC TTTAGTGGTG ATTTGTCGTC GAGGCCACCC CCGGATCCAA
CACAGCCTCA CTAAAGAGGC CTTTTATAAT GAAGAGCATG TATTTTATAG CGGCACCTGG
GAAAAAATTC GAGCCTTCGA ACTCCTTGCC AATGAACCGA TTGAAGATCG CAAAATGGCA
TTAGTCTGTC ATTCCATCGC CAGCATTGCG TTGAATATTT GTCAGAGTGA CGCCATCGCC
GTAATACCGC TCGCATTTGC AGAACAATGG GCAGAAAAGT TAAACCTGCA AATATTAACT
TGCCCCATTA TTACAGATTT GATCCCCTAT CATTTGATGT ATCACAAACG GGAAATTAAA
AATCCCTATC ACAAAAAAAT CAGGGAAGAA ATAAAAGCCA AGATAAAGGC ATTATCTCAG
CAATAG
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| Protein sequence | MDLNLVRTFL VVAECQSYTK AAEHLQLTQP AISAAIKRLE NRYGENLFIK QGRGIELSSK
GQQLIPAFRQ ALSIIENAMN MRTQFNVCCN ESLMSTLFSI DNISLQESPP EKDQLFEHLR
QEKIDIIVDS IRTRDSAFMV EEIYLEPLVV ICRRGHPRIQ HSLTKEAFYN EEHVFYSGTW
EKIRAFELLA NEPIEDRKMA LVCHSIASIA LNICQSDAIA VIPLAFAEQW AEKLNLQILT
CPIITDLIPY HLMYHKREIK NPYHKKIREE IKAKIKALSQ Q
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