Gene Shewmr4_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3387 
Symbol 
ID4253953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4041595 
End bp4042113 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content54% 
IMG OID638120025 
Producthypothetical protein 
Protein accessionYP_735510 
Protein GI113971717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.493947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA TCTTACTGCT TGGTGCAACT CAGTCTCCTC CCAGCAGCTA CATGCTGAGG 
GAGTTAAAAG ACGTGGCTCA GCCCGATCCT GTGAGCTGGT GGCCACAGAC TCTGGGCTGG
CAAATATTGC TGCTGGTATT GCTGCTGTAT CTGGGTTATC GCCTGTATCT CAAGGGGATT
TTCTGGTGGC GAAACCGTTA CCGCCAGGAG GCGATAACGG CCTTGCTGAG TCTGTCGGCG
GAGGATCCGC ATTGGCCGAC GCAGATGATG AAGATTATTA AAATCGTGAT GGTCTACTTA
GAGCCGAAAA ACGCCTCCCT CTACGGTGCT CCTTTGCTCG AGCAGATGGG GCGTTACCAT
ACAAAGGCTC ACCTCGCGAA CGATGAATCG TTTCAGCAGT GGCTAAAATG CCTTGAAGAT
CCTAATGTCG CTCGCCCCGA CTTTAGCGCT GTGCGCCAAG GGCTAAGCCA GTGGTTAAGC
GGGCATCAAT TGCCGGAGGC TCGCCATGGA TCAGCTTGA
 
Protein sequence
MTAILLLGAT QSPPSSYMLR ELKDVAQPDP VSWWPQTLGW QILLLVLLLY LGYRLYLKGI 
FWWRNRYRQE AITALLSLSA EDPHWPTQMM KIIKIVMVYL EPKNASLYGA PLLEQMGRYH
TKAHLANDES FQQWLKCLED PNVARPDFSA VRQGLSQWLS GHQLPEARHG SA