| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3337 |
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| Symbol | |
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| ID | 4253903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3985475 |
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| End bp | 3986194 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119975 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_735460 |
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| Protein GI | 113971667 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.212049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTC CCATTATTAT CACAGGTGTG GGTAAACGCA TTGGCTACGC CCTCGCGAAA
CACTTGCTCG CCCAAGGGCA CAAGGTGATT GGCACCTATC GCAGCCATTA TCCCAGCATC
GATGAGTTGC AGTCTTTGGG CGCGACCTTA ATCCAATGCG ACTTCTACGA TAATACGCAG
CTCCAAACCC TGATTGAGCA ATTGAGCCAA TATCCCAAAA TCCGCGCCAT TATCCATAAC
GCCTCTGACT GGCTGCCAGA TAACAGCCCA AGCCTTGCCG CCCATGAAGT CATGCAGCGC
ATGATGCAGG TGCATGTGAG CGTGCCCTAT CAAATGAACT TGGCCTTAGC CTCGCAGCTG
CGAGCGGGAG CCGAGGGCGA GATTGGCGCC AGCGATATTA TCCATTTCAC CGATTATGTG
GCCGAAAAGG GCAGCGCCAA GCACATGGCT TACGCGGCCA GCAAGGCGGC ACTGGATAAC
TTAACCTTAT CCTTTGCGGC AAAATTGGCA CCTGAGGTCA AAGTGAATGC GATTGCTCCT
GCGATGATCC TCTTTAATCC AAGCGATGAT GAAGCCTATC GGCAAAAGAC CTTGGCTAAG
GCCATCTTGC CAAAAGAAGC TGGAAATCAG GAGATTATCG CCTTAGTGGA TTATCTATTG
GCGAGCCGCT ACGTCACAGG GCGTAGCCAC AATGTCGATG GTGGGCGGCA TTTAAAGTAA
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| Protein sequence | MTAPIIITGV GKRIGYALAK HLLAQGHKVI GTYRSHYPSI DELQSLGATL IQCDFYDNTQ
LQTLIEQLSQ YPKIRAIIHN ASDWLPDNSP SLAAHEVMQR MMQVHVSVPY QMNLALASQL
RAGAEGEIGA SDIIHFTDYV AEKGSAKHMA YAASKAALDN LTLSFAAKLA PEVKVNAIAP
AMILFNPSDD EAYRQKTLAK AILPKEAGNQ EIIALVDYLL ASRYVTGRSH NVDGGRHLK
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