| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3328 |
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| Symbol | |
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| ID | 4253894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3973198 |
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| End bp | 3975351 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638119966 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_735451 |
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| Protein GI | 113971658 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.953553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTA ATCTAAGCCC TGAAATCTGC CTAACTGAAG TAAAAAATAA ACAGTTAAGT
GCATTTTCAT ATCTAAAAAA GGCAAATGAT TGCTTATCAT CTCCACAACT AAACACGATT
GGCCGAGAAT ATTTAATAAG AGCTTTAGAT CAGTTCCAGC TCTTTGAAGA ACAAAAAATA
TTACTACAAA ACCTACTTAG AAAAGCTGGA TTATTTCCGT ATATAAAAAA ATACTTTCAA
AATTTAACTC CTGAAAAAGA GCTTGTTCTA GATATATATA GAAGCAACTT TGACGAAAAT
TTCATTTTCC ATTCTATGCA GGCAAAAGTA TTCAGGTTAC TAATGTCTGG TAAAAATGTG
GTGCTAAGCG CCCCCACAAG CATGGGTAAA AGTGCTATCA TTGATGCACT TATTACAGAG
AGAAAATTTA AAAAGATCGT CATCGTAGTA CCAACTATTG CTCTAATTGA TGAGACTAGG
CGTCGAATTC AAAAAAAATT TGGACTAGAT ATACAAATTA TACATCATGG GTCTCAAATT
AAACGTAAAG ATAGAGTAAT TTACATCCTC ACTCAAGAGC GTGTCAATGA AAGGGATGAC
TTACGCAATA TCGATTTATT CATAATTGAT GAATTTTATA AATTAGCTTA TAACAATGAT
GAGTCATCTC GAGTTATTTC ATTAAATATA GCATTAAGTA AACTGTTAAC AATATCAAAA
CAATTCTACA TGATTGGACC ATACATTGAT GGATTTAGAG GTATGGAAAA ATTAGGTAGA
GACTATACTT TTATTCCATC CGATTTTAAT ACGGTAGCTC TTAATATTCA CAAATATGAT
ATTGCAGCAA ATAATATAAC AAGTAAAAAC GAGCAGTTAG CTAAAATTAT TGAAGAGCAT
AAAGAGCAAA CTATAATATA CTGTAAATCA GCATCGTCTA TCGCACAAAT TATTAACTTC
ATAACTAATT CAGAAAAAAT CAAAGATATA AAAAATAAAA ATACAAAAGA ATATTTAAAA
TGGCTTACTG AAAACTATGG CTATCATTGG AATTGTACTA AAGCAGTAAG TTATGGAATT
GGTATACATC ATGGAGCACT ACCTCGTGCA ATTCAGCAAA AGTCTATTGA TTTATTCAAT
TCTGGTAGAA TTAAATTTTT ATTATGTACA TCCACGATGA TTGAAGGCGT AAACACTTCT
GCAAAAAATA TAGTCATATA TGATAATAGA AAAGGCACAC CATCAATTGA TAACTTTACG
CACAAAAACA TTTCTGGTCG TGCTGGACGA ATGAACCAAT ATCTCATTGG TAATGTTTTC
TGCCTTGAGG AAATACCTCC AAAAGAAACT CAGGTAGTAG AACTACCTTT AGGTCAAATA
AATGAAAACT CACCAATTAA TTTATTAGCC GGAATTCAAT CAGAACATTT GTCGGATAGA
GGAAGTCAAA TTTTAAATAC GTTTTCAAAA ACATACAATA TTCCAATTGA AATCATAAAA
AAACATCAAT CATATAAAGC AGAAGTAATT GCAGATGGTT ATAAGTTTTT AACAGAGCTA
TCTTATCATA ACAAAAATGA ATTAATTAAG ATAAAAACAC CTAAAAAACA TCAATTGGAA
TTACTTACAG AATTTATAAA AAAAGTTGAG TATGGAGCCC TTAGCAAAAT TAACATACAT
TATCTTGATA ACGACGAACT AAAAAATCGT TTAGGGTGGT ATGTTTATGC GGATAGTCAT
AGTTCATATT TAAAAGAAAG AATAGAACAT ATCTATGAAT CAAGAATAGA TGAACAATTA
CGTTCTGATG CAACAGATAA AGAGCTTAAG ATAGTCAGAA ATATTTTTAA GCATGCAGTT
ACTAGAGCAT TACTACTTTT AGAAGATCTA TTAAATTATG AAATGAACAA TTTAGTAGAT
AATAAAGCAG ATTTTGGCTA CTTAATTCAC TTGTTTGAAA ACAATCATTT ACCTCCTTCA
TTCTCTGCAC TAGAAGAAAT GGGGATCCCT ATCGAAACAT TAGAGAAGCT CGTTACAGAT
AGACTAAGTG AAACCAGTAT TGACATATTA ATAAGATATT TACGAATGCA TTACAATTAT
TTGCCACAAT TAAGTTACAT GGATAAATCA TTTATCAAAC AAGCAGTTTT GTAA
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| Protein sequence | MDTNLSPEIC LTEVKNKQLS AFSYLKKAND CLSSPQLNTI GREYLIRALD QFQLFEEQKI
LLQNLLRKAG LFPYIKKYFQ NLTPEKELVL DIYRSNFDEN FIFHSMQAKV FRLLMSGKNV
VLSAPTSMGK SAIIDALITE RKFKKIVIVV PTIALIDETR RRIQKKFGLD IQIIHHGSQI
KRKDRVIYIL TQERVNERDD LRNIDLFIID EFYKLAYNND ESSRVISLNI ALSKLLTISK
QFYMIGPYID GFRGMEKLGR DYTFIPSDFN TVALNIHKYD IAANNITSKN EQLAKIIEEH
KEQTIIYCKS ASSIAQIINF ITNSEKIKDI KNKNTKEYLK WLTENYGYHW NCTKAVSYGI
GIHHGALPRA IQQKSIDLFN SGRIKFLLCT STMIEGVNTS AKNIVIYDNR KGTPSIDNFT
HKNISGRAGR MNQYLIGNVF CLEEIPPKET QVVELPLGQI NENSPINLLA GIQSEHLSDR
GSQILNTFSK TYNIPIEIIK KHQSYKAEVI ADGYKFLTEL SYHNKNELIK IKTPKKHQLE
LLTEFIKKVE YGALSKINIH YLDNDELKNR LGWYVYADSH SSYLKERIEH IYESRIDEQL
RSDATDKELK IVRNIFKHAV TRALLLLEDL LNYEMNNLVD NKADFGYLIH LFENNHLPPS
FSALEEMGIP IETLEKLVTD RLSETSIDIL IRYLRMHYNY LPQLSYMDKS FIKQAVL
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