Gene Shewmr4_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3285 
Symbol 
ID4253852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3922352 
End bp3923527 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content50% 
IMG OID638119924 
Productmajor facilitator transporter 
Protein accessionYP_735409 
Protein GI113971616 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATAA AAATTACCCA TAAATATCTC GTAGAAGGCT TGGTTTTTAC CAGTTACGTC 
TTATTTGCAA TGGCATGGGT TGGCGGCACC GCGAGTATGA ATAACATCAT GGCCTCGATG
CATATCGAGA GTTATGCCTC CGCCAGTTTA TTGAGCGGCG CTGTCACCTT AGCCAAAATT
GTCGGCACCT TTGCTGCGGC CTATCTCACC CTCAAATTTG GGGTGAAGTA TGCGTTTTTA
GTCGCGGCCT TATTGATAGT CACGGGCATC ATGACACCCT ACGCCCCAAA CTATGAGTTA
CTGCTGGTGA GCCGCTTTTT AATGGGGCTG GGCGGCGCCT TTATGATTGT CTATTTCAAC
CCGATTGTGA TGCACTGGTT TGCCCCTGAA GAGCGCCCAG TGATCAACGG ATTAAACGCG
GTGGCCTTTA ATGTGGGCAC GGCTATCGTG CTTTGGGGTA TGCCAAGCAT CAACGCCATC
AGCGGCGGTT GGCAACAAAG CCTTCTGGTG TTTTCCATTG CCAGTCTGGT ACTGGCGCTA
CTGTGGTTAT TGGTGAAGTT TGAACAAGCC CCTAGCCATC AAGCCAATAC ACAACAAGAT
GCCATCAACT CATACTCCTA TCTCGATGGC TTAAAAGACG GCTTTAACTG GGCCTATGCC
CTCACCTACT CGGGATTATT ATCCTTTTAT ATTTGCCTAT TCACCTTTTA TCCGCAGGCG
GGCATCAGCC AGAGTAAGTG GGTGATTGGT TTTGGGATTG TCGGCACCAT AGCGGGGATA
CTCTATAGCC GTAAACAGCC CCTGCGCCTG CCAATTATTC GCCTCAGCGG CCTGCTTATT
TTCTTAACCG TGTTAGGGCT CTCCTTTGGC TCGGCGCCCT GGCTGCAAAC CCTGTGCGCC
ATCGTCTTAG GCTTTTGCAT CTTTTTACCC GTCACCGCTT TAGTCTCGAT TCCCCACGAG
CTACCTAAGA TGACCAGCCA AAAAATCACG GTGATTTTTA GCCTGTTTTG GTCCATCAGC
TATCTGATTT CGACCTTAGT GCTATGGCTG TTTGGCAAGC TCGTGGATAT CAACCAAGGC
AGTTACTTCG CCTCGTTTGT GCTGATCACC CTATTAAGCG CCACAGTGTT TGTTGGCAGC
TATTTTCTCC CCGAAACCGG ACAAGCTAAG GAGTAA
 
Protein sequence
MPIKITHKYL VEGLVFTSYV LFAMAWVGGT ASMNNIMASM HIESYASASL LSGAVTLAKI 
VGTFAAAYLT LKFGVKYAFL VAALLIVTGI MTPYAPNYEL LLVSRFLMGL GGAFMIVYFN
PIVMHWFAPE ERPVINGLNA VAFNVGTAIV LWGMPSINAI SGGWQQSLLV FSIASLVLAL
LWLLVKFEQA PSHQANTQQD AINSYSYLDG LKDGFNWAYA LTYSGLLSFY ICLFTFYPQA
GISQSKWVIG FGIVGTIAGI LYSRKQPLRL PIIRLSGLLI FLTVLGLSFG SAPWLQTLCA
IVLGFCIFLP VTALVSIPHE LPKMTSQKIT VIFSLFWSIS YLISTLVLWL FGKLVDINQG
SYFASFVLIT LLSATVFVGS YFLPETGQAK E