Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3279 |
Symbol | |
ID | 4253846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3912514 |
End bp | 3913224 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119918 |
Product | hypothetical protein |
Protein accession | YP_735403 |
Protein GI | 113971610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0613272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGC TTCCCGTAAA AATAAGCCTG CTAGCTCTCG CTCTGTTAGG GCTTGGTGCC TGCTCAGACA GTGACAACCC GCCACCTGAG CCACCCGCGC CGCCTCCAGT AGTGATGAAA AGCTTTGAAG TGACAGTCAC TAATCTCACT GCCAATCAGC CTATGTCACC GCTGGCGCTC ATCGGTCACG ACAATGGCAT TAAGCTTTGG GAAATCGGCG AAAGTGCCAG CGTAGCGCTG GAGCAGTTGG CCGAAGGTGG TAGCAGTTCC GAATTTGAAA CCATGAGCGG TGTTGATGCC ATAGTGCGCG GCGCAGGTTT GTTGTCACCA GGCATGAGTG AAACCCTCAC CCTGACACTG GAAGAAGACA AGGTCGATGC CCTGTCGCTG CTGACCATGC TGGTCAATAC CAACGATGCC TTCAGCGGTA TCAACGCTAC GGATATTGAA TCCTTGGAAA ATGGCGCTAG CAAAACCTTC AGGTTGATGG CATACGATGC GGGCACTGAG GCCAACTCTG AGGCCAAGGG TAGCATTCCC GGTCCAGCAG ATGGGGGCGA AGGTTTTAAT GCTGCGCGGG ACGATGTGGA TCGGGTCCAT GTACATCCCG GAGTCATCAG TCAGGACGAT GGTTTGACTG ACTCGGTATT GCAGGCCTCA CACAAGTTTG ACAACCCTGT ACTCAAGGTG ATGGTAAAAC GCACCGAATA A
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Protein sequence | MNKLPVKISL LALALLGLGA CSDSDNPPPE PPAPPPVVMK SFEVTVTNLT ANQPMSPLAL IGHDNGIKLW EIGESASVAL EQLAEGGSSS EFETMSGVDA IVRGAGLLSP GMSETLTLTL EEDKVDALSL LTMLVNTNDA FSGINATDIE SLENGASKTF RLMAYDAGTE ANSEAKGSIP GPADGGEGFN AARDDVDRVH VHPGVISQDD GLTDSVLQAS HKFDNPVLKV MVKRTE
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