Gene Shewmr4_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3279 
Symbol 
ID4253846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3912514 
End bp3913224 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content53% 
IMG OID638119918 
Producthypothetical protein 
Protein accessionYP_735403 
Protein GI113971610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0613272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC TTCCCGTAAA AATAAGCCTG CTAGCTCTCG CTCTGTTAGG GCTTGGTGCC 
TGCTCAGACA GTGACAACCC GCCACCTGAG CCACCCGCGC CGCCTCCAGT AGTGATGAAA
AGCTTTGAAG TGACAGTCAC TAATCTCACT GCCAATCAGC CTATGTCACC GCTGGCGCTC
ATCGGTCACG ACAATGGCAT TAAGCTTTGG GAAATCGGCG AAAGTGCCAG CGTAGCGCTG
GAGCAGTTGG CCGAAGGTGG TAGCAGTTCC GAATTTGAAA CCATGAGCGG TGTTGATGCC
ATAGTGCGCG GCGCAGGTTT GTTGTCACCA GGCATGAGTG AAACCCTCAC CCTGACACTG
GAAGAAGACA AGGTCGATGC CCTGTCGCTG CTGACCATGC TGGTCAATAC CAACGATGCC
TTCAGCGGTA TCAACGCTAC GGATATTGAA TCCTTGGAAA ATGGCGCTAG CAAAACCTTC
AGGTTGATGG CATACGATGC GGGCACTGAG GCCAACTCTG AGGCCAAGGG TAGCATTCCC
GGTCCAGCAG ATGGGGGCGA AGGTTTTAAT GCTGCGCGGG ACGATGTGGA TCGGGTCCAT
GTACATCCCG GAGTCATCAG TCAGGACGAT GGTTTGACTG ACTCGGTATT GCAGGCCTCA
CACAAGTTTG ACAACCCTGT ACTCAAGGTG ATGGTAAAAC GCACCGAATA A
 
Protein sequence
MNKLPVKISL LALALLGLGA CSDSDNPPPE PPAPPPVVMK SFEVTVTNLT ANQPMSPLAL 
IGHDNGIKLW EIGESASVAL EQLAEGGSSS EFETMSGVDA IVRGAGLLSP GMSETLTLTL
EEDKVDALSL LTMLVNTNDA FSGINATDIE SLENGASKTF RLMAYDAGTE ANSEAKGSIP
GPADGGEGFN AARDDVDRVH VHPGVISQDD GLTDSVLQAS HKFDNPVLKV MVKRTE