| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3219 |
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| Symbol | |
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| ID | 4253787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3846555 |
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| End bp | 3848597 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119858 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_735344 |
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| Protein GI | 113971551 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000100242 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAAAGC GTGCAAAATC ACCCCGTAAA TGGCGCGCCA ATCATTGCCA CTACCTCGCA
TCGCAGTTTA GTGAAGCATT GATTTTTGCC GTCATAACCG TCGATAAAGC GGTGCCATCC
TCAATACTGG GCGCAATCAC AGGCGAGCAG ATTGAGCCGT TTCTTCGCCT GAGCCTAGAG
GATGCATCAC TCAAGCTACC AAGCAAAGAC CGGGCACCGC TCAACACGGC AACGGTTAAG
CATAACGCGC AGTTTCTTGG TCAGTTGTTT GGCTTAATGC CGCAGATGCA ACCTGTAGTT
GAGTTCTTGA TTGTCATCAA TGCCAATGCC GGACTCAGGG AGTTAACCGA GTTCCTGATT
GATGATGACT TTGATGTACT TGAACGCATG CTACTGGCTA AGACAACCCT TGATTTAGAG
GTCATTCTGT CGCAGTTGGC GGTGTTCGAG CGTTACCAAC TGATTGCAGA AGCGACCTTG
GGTGCACCTT ATCGATTGCT GTTCCCAAGC GTACTGGTAT CCATTTTAGT GTCGCAGAAG
TTAACCAGCG CGGTCGACTT CTTAGCCCCC ATGCTCAGCA AAAGCCCCGA GGCACAATTT
AGTCTGTCGC AATTTGGGCA TGTGAACACT GACTTACTGG CTAACTACCT TGCGGCCATT
ACTCAAAAGC CCTCGGTAGG CGTCAATATC CTGCTCTATG GTAAAGCGGG TACAGGTAAA
ACTGAGCTGG CTCGGACATT GGCAAAGACG ATTAAGCGCA ATCTACTGGA AGTCCAAAGT
CAGCAGTTAA TCGAGAGCCA ATACCGAAAT GACAACATTG CAAAGGCAAC CAGCATACGC
CTTGCTCACC TGAACTTGTT ACAAGGTCTA CTGGCTCACA GCAATGACAG CTTGTTATTG
GTCGATGAGT GTGAAGCATT ATTTGTGCAA GTCGATGAAC AGTATTCCAA AGAACAATTG
ATGCAAGCGC TAGAGCAAAA CCCTGTCCCT GCCATTTGGA TTACCAACCA TGTTGGCTTG
TTAGAACCTA GCTTTATTCG CCGTTTTAAG TTGGTGATGG AAGTCCCTGT ACCCGATGAA
CCCTTTGCCT ATGCCATTAA TGAGCACTTA CTGACACCGC TTAAGGTATC ACAGGACTAT
CACCTGCTAC TGGCAGAAAA GCCCAATGTC ACCCCCGCCA TGGTTGGTAA TGCTGCCCAT
GTGGCGATGA CACTCAAACT CAAAGGTGCA AAGGCGGAAG TCCTTATCGA TGAAGTGATT
GATGCCGCCC TAGAAGCCTG TGGTGAAGAA GCGCCGCCGC CAAAGTATCA AGGGGAGCTG
GCGTTCGATA GCAACATGGT CAACTTCAAG GGCAGTGATG ATGTGACAAG TATGACTACC
GATGAAACAC TGGCCTCGAT TAACCATGCC GTTAAGCAGG CCATGCCAAT TAGGGTGATG
CTGAGTGGTC CCCCTGGTAC GGGCAAGACT GCATGGGTAC ATCACTTAGC TGAAACCCAC
GGGTTTGAGC TGATGCACAT CAAATGCTCT GATGTACTCA GTAAGTATGT CGGGGACAGC
GAGCAGAACA TCGCTAGGCT CTTCAGAGAA GCACACAGAC AGCAAAAGCT GATGCTCATC
GATGAAGTCG ATAGCTTGCT CAGCAAACGC GATAGCGCTC AAGCGCTGCA TGAAGTGCAG
CTCGTTAACG AACTGCTATC ACAGCTTGAA TGCAACACTC TACCCGTGTT CGCTGCAACC
AATGCGCTTT CCAGTATTGA TAGTGCGGTC ATGCGCCGAT TTGATTTCAA GTTGGTGTGT
GACTATTTAA CGAGTGACCA ACGGCAAGCA ATGTATAGGC AAGTCCTTGG CATTAAGCGC
CTAACTCATG AAGAAGTCTC AACCCTAAAC ACCCTAAACC AATTAACGCC CGGCGACTTT
GCCATCTTAA CAAGACGCCA ACGTTTTGAA CCCAAGCGCG ACCACCGCGC AACCGCCCTT
GCGCTCCTCA CCACCGAGAA CAGCCGCAAA CAAGGGCAAC CTCGTATCGG ATTTATCCGC
TAA
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| Protein sequence | MLKRAKSPRK WRANHCHYLA SQFSEALIFA VITVDKAVPS SILGAITGEQ IEPFLRLSLE
DASLKLPSKD RAPLNTATVK HNAQFLGQLF GLMPQMQPVV EFLIVINANA GLRELTEFLI
DDDFDVLERM LLAKTTLDLE VILSQLAVFE RYQLIAEATL GAPYRLLFPS VLVSILVSQK
LTSAVDFLAP MLSKSPEAQF SLSQFGHVNT DLLANYLAAI TQKPSVGVNI LLYGKAGTGK
TELARTLAKT IKRNLLEVQS QQLIESQYRN DNIAKATSIR LAHLNLLQGL LAHSNDSLLL
VDECEALFVQ VDEQYSKEQL MQALEQNPVP AIWITNHVGL LEPSFIRRFK LVMEVPVPDE
PFAYAINEHL LTPLKVSQDY HLLLAEKPNV TPAMVGNAAH VAMTLKLKGA KAEVLIDEVI
DAALEACGEE APPPKYQGEL AFDSNMVNFK GSDDVTSMTT DETLASINHA VKQAMPIRVM
LSGPPGTGKT AWVHHLAETH GFELMHIKCS DVLSKYVGDS EQNIARLFRE AHRQQKLMLI
DEVDSLLSKR DSAQALHEVQ LVNELLSQLE CNTLPVFAAT NALSSIDSAV MRRFDFKLVC
DYLTSDQRQA MYRQVLGIKR LTHEEVSTLN TLNQLTPGDF AILTRRQRFE PKRDHRATAL
ALLTTENSRK QGQPRIGFIR
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