| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3173 |
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| Symbol | |
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| ID | 4253743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3791722 |
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| End bp | 3792669 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119814 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_735300 |
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| Protein GI | 113971507 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.283101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.911812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGACA TCAAGCTCTT TGCTGGGAAC GCCACCCCCA GTCTCGCTAA GAAGATAGCC
GATCGTCTAT TTTGTAAACT CGGAGACGCA GTGGTTGGTC GTTTCAGCGA TGGTGAAATC
AGTGTCCAAA TTAACGAAAA TGTACGTGGT GCCGATGTGT TTATCATCCA ATCCACCTGC
GCCCCAACCA ACGATAACCT AATGGAACTT ATCGTTATGG TTGACGCGCT ACGCCGTGCA
TCAGCCGGTC GTATCACTGC CGTTATTCCT TACTTTGGTT ATGCTCGTCA AGACCGTCGC
GTACGTAGCG CACGTGTACC TATTACTGCG AAAGTGGTTG CTGACTTCCT GTCAAGCGTC
GGTGTTGACC GCGTTCTGAC CTGTGATTTA CACGCAGAGC AAATTCAAGG CTTCTTCGAC
GTACCAGTAG ACAACGTGTT CGGTAGCCCT GTGCTGCTCG AAGATATGCT GGCGAAGAAA
TTAGATAACC CAGTGGTTGT TTCTCCAGAT ATCGGTGGTG TTGTCCGCGC TCGTGCAGTG
GCAAAACTAT TAGATGATTC TGATCTAGCC ATTATCGACA AGCGTCGTCC ACAGGCAAAC
GTAGCGCAAG TGATGCACAT CATTGGTGAC GTTCAAGGCC GTGACTGCAT TATCGTTGAC
GATATGATCG ACACAGGCGG CACTCTGTGT AAAGCGGCTG AAGCCTTAAA AGAACACGGT
GCAAACCGCG TATTTGCTTA CGCGACTCAC CCAGTATTCT CTGGCAAAGC GGCTGAAAAT
ATCGAAAACT CAGTGATCGA TGAAGTGATC GTGACCGATA CCGTACCTTT AAGCCCTGAA
ATGCTTAAAG TAGCTAAAGT GACTCAACTG ACGATGTCGG CCGTATTGGC AGAAGCCATT
CGCCGCGTCA GCAACGAAGA GTCTATCTCT GCAATGTTCA GCCACTAA
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| Protein sequence | MPDIKLFAGN ATPSLAKKIA DRLFCKLGDA VVGRFSDGEI SVQINENVRG ADVFIIQSTC
APTNDNLMEL IVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTCDL HAEQIQGFFD VPVDNVFGSP VLLEDMLAKK LDNPVVVSPD IGGVVRARAV
AKLLDDSDLA IIDKRRPQAN VAQVMHIIGD VQGRDCIIVD DMIDTGGTLC KAAEALKEHG
ANRVFAYATH PVFSGKAAEN IENSVIDEVI VTDTVPLSPE MLKVAKVTQL TMSAVLAEAI
RRVSNEESIS AMFSH
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