Gene Shewmr4_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3048 
Symbol 
ID4253619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3648566 
End bp3649042 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID638119690 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_735176 
Protein GI113971383 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000741101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0835188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC AAACACGGGT ATCGAATGTG ACATTGAGGC CCATAGGGCA AGACGATCTG 
GAGTTGATCT TCACCCATCA ACAGGATCCG ATTGCATCCC AATTGGCACA GTTTCCCTCG
CGGGCTCGAG AGGCGTTTTA CCTTCATTGG CAGCAAAATA TCCTCGGACA GGCGTCGGTA
CTGGCACGAG GGATAGAAGT CGATGGCTTG CTGGTTGGCA ATATCGGTCA TTGGCATATG
GATGGTCAGG CGATGATTGG TTACTGGATT GACCGCGCAT TTTGGGGGCG CGGGGTAGCA
ACCTTAACCT TAAGCGCATT TTTACCTTTA GTGACCTCAA GGCCGCTTTT TGCCCATGTA
GCACAGCATA ATCTTGCGTC CCAGCGAGTG CTGCTGCGAC ACGGATTTGT AAAGACGGAT
ACTTTAATTC AAGAGAAGGG AGATGCGGCG CCACTGTTCG AGTTGGTACT GCGCTGA
 
Protein sequence
MDKQTRVSNV TLRPIGQDDL ELIFTHQQDP IASQLAQFPS RAREAFYLHW QQNILGQASV 
LARGIEVDGL LVGNIGHWHM DGQAMIGYWI DRAFWGRGVA TLTLSAFLPL VTSRPLFAHV
AQHNLASQRV LLRHGFVKTD TLIQEKGDAA PLFELVLR