| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3037 |
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| Symbol | |
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| ID | 4253608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3631298 |
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| End bp | 3631843 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119679 |
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| Product | peptide deformylase |
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| Protein accession | YP_735165 |
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| Protein GI | 113971372 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000308072 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.575591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAG ATGCGATATC ACCCACACCC AGTCAGCCAC TGCCGATAGC CGTGGTGGGT
GAAGCCATTT TAAAAGAGCA AGCCGTTGAA GTTCGCGACT TCGATACGGC CTTGAGTCAA
TTAGCAGAGC AGATGGCTGT GAGCATGGTG GCCGCGAAAG GCGTTGGTAT TGCCGCGCCG
CAAGTGCACA GCCCGCTGGC ACTGTTTATC ATGGCATCAC GGCCGAACGA GCGTTACCCC
GATGCGCCGC TGATGGACCC TGTCGTGGTG GTCAACCCAG AGATCTTGTC TGCCTCTGCG
GATTTAGTCA GCGGCGAAGA AGGTTGTTTA TCGGTTCCTG GGCAAAGGTT TACAATTTGG
CGCCACCAGC AGATAGTAGT GCGCTATCAA AACCTCGCAG GACAGTGGCA ACGCTCTGAG
TTAACAGGTT TTATTGCACG TATTTTTCAA CATGAGTTTG ATCATCTTCA GGGGATCACT
TTGCTTGAGC GTTCACAAAT GCCAGAACAA AAACACATGG CGCTAGAAGG TAAACCACAG
GCATGA
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| Protein sequence | MFKDAISPTP SQPLPIAVVG EAILKEQAVE VRDFDTALSQ LAEQMAVSMV AAKGVGIAAP
QVHSPLALFI MASRPNERYP DAPLMDPVVV VNPEILSASA DLVSGEEGCL SVPGQRFTIW
RHQQIVVRYQ NLAGQWQRSE LTGFIARIFQ HEFDHLQGIT LLERSQMPEQ KHMALEGKPQ
A
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