Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2999 |
Symbol | |
ID | 4253570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3587919 |
End bp | 3588533 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119641 |
Product | NADPH-dependent FMN reductase |
Protein accession | YP_735127 |
Protein GI | 113971334 |
COG category | [R] General function prediction only |
COG ID | [COG0431] Predicted flavoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00930809 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.251382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTAC TCATCATCAG CACCAGTCAA AGAGCCAACT CGCAAAGCGC TAAAGTCGCG AGATATATAG CCGAAACCAG TTTTTTATCG CCCCATAGTG TCGGTTACGA CGCTATCCAT CATTTAGAAC TTTGCCAGTT CAATCTGCCA TTTTGGGATG GTGAAGAGGA CAACAAGGGC GAACATTGGC CTGAGATTGA GCGAAGAGTC GATGCGGCAG ATGCCTTGGT TTTGATCACG CCCGAATGGG GTGGAATGGC ATCGCCACTG CTTAAAAACT TCCTGCTGAT GTGTAGCCGC CAGGAAACCG CCCATAAGCC AGTGTTGCTG ATTTCAGTTT GCAGCGGCAT TAGCGGCGCC TACCCTATTG TGGAAGTCAA AATGAATGCT CTCAAAAACA ATAAATTGGT GCCCATTCCC GACCATTTGA TCATCCGTAA TGTCGAGAAT GTACTCAACG CCACGCCCCA AGGTACGCGG GATATCAACC TCAGGGAAAG AGTGCAATAC AGCCTGTTTA TGTTGCATCA ATACGCCCAA GCCTTAGCGC CGATACGCCA ACGTCATATT CATCAACCCT ATCCCAAGCA GCAGGAATAC TGCTACGGTA TGTAA
|
Protein sequence | MNLLIISTSQ RANSQSAKVA RYIAETSFLS PHSVGYDAIH HLELCQFNLP FWDGEEDNKG EHWPEIERRV DAADALVLIT PEWGGMASPL LKNFLLMCSR QETAHKPVLL ISVCSGISGA YPIVEVKMNA LKNNKLVPIP DHLIIRNVEN VLNATPQGTR DINLRERVQY SLFMLHQYAQ ALAPIRQRHI HQPYPKQQEY CYGM
|
| |