| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2956 |
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| Symbol | lspA |
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| ID | 4253527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3530069 |
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| End bp | 3530581 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638119592 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_735084 |
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| Protein GI | 113971291 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0330316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.232232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAA CTTGGAAAGA CAGTGGCTTA CGTTGGTATT GGGTAGTTGT ATTGGTGTTT
TTGGCCGATC AACTATCCAA ACAATGGGTC TTAGCCAATT TTGATTTGTT CGAATCGGTG
AAGTTATTAC CTTTTTTTAA TTTCACCTAT GTACGTAACT ATGGCGCCGC ATTTAGCTTT
TTAAGTGAAG CAGGCGGTTG GCAACGTTGG TTATTTACCT TAGTGGCTGT TGGTTTCAGT
ACCTTGTTGA CTGTGTGGCT GCGCAAGCAA TCGGCATCCC TCTGGAAGTT AAACTTGGCT
TACACCTTAG TGATTGGTGG CGCCCTAGGT AACTTAATCG ATCGATTGAT GCACGGTTTT
GTGGTGGATT TTATCGATTT TTATTGGGGT AAGAGCCATT ATCCCGCCTT TAATATCGCC
GATTCCGCGA TTTTTATCGG CGCAGTGCTG ATCATTTGGG ATTCGTTTTT TAACAGCAAA
TCCGAACAAG ATAAAACCGA AGAGGTGAAG TAG
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| Protein sequence | MPLTWKDSGL RWYWVVVLVF LADQLSKQWV LANFDLFESV KLLPFFNFTY VRNYGAAFSF
LSEAGGWQRW LFTLVAVGFS TLLTVWLRKQ SASLWKLNLA YTLVIGGALG NLIDRLMHGF
VVDFIDFYWG KSHYPAFNIA DSAIFIGAVL IIWDSFFNSK SEQDKTEEVK
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