| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2936 |
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| Symbol | |
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| ID | 4253507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3505848 |
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| End bp | 3508538 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119572 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_735064 |
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| Protein GI | 113971271 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000338099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.491372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA CGATTGCCGC CACCGCGATT TTATTGGCTC TGGGCTTAAC GGCCTGTAGC
GATGTGCCTA AAACCGAGGC AGTGCCTAGC TCAAGTACTG CTGAGCAGGC TAAGCCCAAC
CAATTAACCC AAGCGCAATT GCAGCAGTTT GGGGATACCT TGGGCGTGAG TTATCGCGTG
CTCACTAACA GGCCCGACGA TAGCTGTGAC AAAGCCGCCG CCGAAGGTCG TTGTTTTGTT
GCTGAAATCG ATTTTGTCCC AGAGGTTGAG CTTAAGAGCC GTGATTGGGC GATTTATTTT
AGTCAAATGC GCCCAGTTCA AGCCGTTGAA AGCAAAGAGT TTAGTATTAC GCATATCAAG
GGCGATCTCT ATCGCATCGC GCCCACTGAG GCATTTAACG GTTTTAGCAA GGGCGAGAAA
AAGACCCTAA GGTTCCGCGG TGAGTTGTGG CAGCTCTCAG AAACCGATGC CATGCCCAAC
TATTACATAG TTGCAGGCGA TTTATCGCCA GTGGTGATCG CCAGCACGCA AGTGCAGCAA
GATCCTGAGA CACAGATGGA AGTGCGCCCC TATGTTGAGG CGTACACCGA TATGGTGAAG
CAGTATCGCC GTACCGATGC GGATAAATTA GCGCCTGCGA CGCCTGCGCA GTTGTTTAGC
AATAATCAAC AGGTCAGTGA AGATGCCAGC TTAGCGGTCA ATACCATTAT TCCGACGCCG
CAAAAAGTCG CTATCCACAG CCAAGATAAA GCCGTGTCAC TGACCTCTGG TATTAAACTG
GATTTCGGTT CAGTCACTAA CGCATCAGCC GCGCAACAAT CTTTGGATTC TAAACACTTG
GCGGCGGCAC TTTCCCGTTT AGCGCGCTTA GGCGTTAACG AGTCAGAACA AGGTGTAGCG
GTAAAGCTGA ACTGGCGTCA AGGCGCTGAG GGCAGCTATC TGCTGGATAT CAAAGCGGAT
GCTATAGATA TTGCCGCAGC CGATGCTGCC GGGTTTTCCT ATGCGTTATC GTCACTTGCT
AGTTTGATTG ATGTGCAGGA TCTGCGCGTA AATGCCATGA CGATTGAGGA TAGCCCAAGG
TATCCCTTCC GTGGCATGCA TATCGACGTG GCCCGTAACT TCCATAGCAA GGCGTTGGTC
TTTGATCTGT TGGATCAAAT GGCTGCATAC AAGCTCAACA AATTGCACCT ACATATGGCC
GACGATGAAG GTTGGCGCCT AGAGATCGAT GGCCTGCCGG AACTGACCGA CATCGGCAGT
AAGCGTTGCC ACGATCTTGA GGAAAATACC TGTCTGTTAC CGCAGCTTGG CAGCGGGCCT
TTTGCGGATG TGCCCGTCAA CGGTTTCTAT AGCAAACAAG ACTATATCGA CATCGTTAAA
TATGCCGATG CGCGCCAAAT TCAAGTGATC CCTTCGATGG ACATGCCTGG CCATAGCCGC
GCGGCGATAA AATCGATGGA GGCGCGTTAC CGTAAGCTAG TGGCCGAAGG TAAAGCTGAG
GAAGCTAAAA CCTATCTGTT GTCGGATGCG GCGGACACCA CAGTGTATTC TTCGGTGCAG
TATTACAACG ATAACACCTT GAACGTCTGC ATGGAGTCGA CCTATCTGTT TGTCGATAAA
GTCATTGATG AAATTGCAAA ATTACACCAA GCAGCGGGCC AGCCATTAAC CCGATACCAT
ATCGGTGCCG ACGAAACGGC AGGGGCGTGG AAGCAATCGC CAGCTTGTTT GGACTTTGTG
GCCAATAACG ATAAAGGCGT GAAATCCATC GACGATTTAG GGGCGTACTT TATTGAGCGC
ATTTCGAATC AGCTCGCGAG TAAAGGCATC GAAGCGGCGG GTTGGAGCGA TGGCATGAGC
CATGTTCGCC CAAGCAACAT GCCTGCTAAA GTCCAATCCA ACATTTGGGA TGTGATTGCC
TATAAGGGCT ATGAGCATGC CAATCAGCAA GTCAACAACG GCTGGGATGT GGTGCTCTCA
AACCCTGAGG TGCTTTATTT TGATTTCCCC TATGAAGCCG ATCCTAAGGA GCATGGCTAC
TACTGGGCAA GCCGCGCAAC CAACGCGCAC AAAGTGTTTA GCTTTATGCC GGACAACTTA
GTGGCAAACG CGGAGCAGTG GACCGATATT CAAAATCTAC CTTTTGAGGC CGACGATAGG
GCCAGAACCG ATGAGAAGGG CAAACAATCT GGCCCAAGGG AACAAGGTAA AGCCTTTGCC
GGATTACAAG GCCAGCTCTG GAGTGAAACC ATCCGCAGTG ATAACACCGT GGAATATATG
ATTTTCCCGC GTTTATTGAT GCTGGCGGAG CGTGCTTGGC ATCAAGCCGC GTGGGAAGTG
CCATATCAAT ATCAAGGCGC TTTGTATAAT CAAACTACGG GACATTTCAC CGCTGCTATG
CGTGAGGCTC AGGCGCAATC TTGGCAGCAA ATGGCTAACA CCTTAGGACA TAAGGAGTTT
ATCAAACTCG ATAAAGCGGG TATCGATTAC CGAGTGCCGA CCGTCGGCGC CGAGATCCGT
GACGGTAAAC TGTTTGCCAA CGTCGCTTAT CCAGGACTCA AGATTGAATG GCGCCAAGCG
AGTGGGCAAT GGCAATCCTA TCAAGCTGGG CAGGCGGTAA CGGGCCCTGT TGAGATCCGC
GCCATCGCGG CCGATGGAAA ACGTAAAGGC CGCAGCTTAG TCGTTAATTA A
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| Protein sequence | MNKTIAATAI LLALGLTACS DVPKTEAVPS SSTAEQAKPN QLTQAQLQQF GDTLGVSYRV
LTNRPDDSCD KAAAEGRCFV AEIDFVPEVE LKSRDWAIYF SQMRPVQAVE SKEFSITHIK
GDLYRIAPTE AFNGFSKGEK KTLRFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVQQ
DPETQMEVRP YVEAYTDMVK QYRRTDADKL APATPAQLFS NNQQVSEDAS LAVNTIIPTP
QKVAIHSQDK AVSLTSGIKL DFGSVTNASA AQQSLDSKHL AAALSRLARL GVNESEQGVA
VKLNWRQGAE GSYLLDIKAD AIDIAAADAA GFSYALSSLA SLIDVQDLRV NAMTIEDSPR
YPFRGMHIDV ARNFHSKALV FDLLDQMAAY KLNKLHLHMA DDEGWRLEID GLPELTDIGS
KRCHDLEENT CLLPQLGSGP FADVPVNGFY SKQDYIDIVK YADARQIQVI PSMDMPGHSR
AAIKSMEARY RKLVAEGKAE EAKTYLLSDA ADTTVYSSVQ YYNDNTLNVC MESTYLFVDK
VIDEIAKLHQ AAGQPLTRYH IGADETAGAW KQSPACLDFV ANNDKGVKSI DDLGAYFIER
ISNQLASKGI EAAGWSDGMS HVRPSNMPAK VQSNIWDVIA YKGYEHANQQ VNNGWDVVLS
NPEVLYFDFP YEADPKEHGY YWASRATNAH KVFSFMPDNL VANAEQWTDI QNLPFEADDR
ARTDEKGKQS GPREQGKAFA GLQGQLWSET IRSDNTVEYM IFPRLLMLAE RAWHQAAWEV
PYQYQGALYN QTTGHFTAAM REAQAQSWQQ MANTLGHKEF IKLDKAGIDY RVPTVGAEIR
DGKLFANVAY PGLKIEWRQA SGQWQSYQAG QAVTGPVEIR AIAADGKRKG RSLVVN
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