| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2894 |
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| Symbol | |
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| ID | 4253465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3455267 |
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| End bp | 3456577 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119529 |
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| Product | citrate transporter |
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| Protein accession | YP_735022 |
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| Protein GI | 113971229 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00002899 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACTCA ATAGCTCGCC TTTGGCTTGC CACGACATTA AAACAGCAGT TGGAATTGCA
GTTATGTTAT ATACCTTTCT GATCATACTG GCGGTGCTCG CATTGCTCAG TATTATTTTC
GAAGAAGTCA CCCACCTTAA TAAAGCAAAA ACCACCTTAT TCTTTGGCTG TATTTCCTGG
GTAGCACTGT TTATGGCTGC CGGAGACGCC AACCATGAGA AACTGGTTGC CCATCAACTC
AATGAAAACT TGCTCGAAAT TGCCACCCTG TGGCTGTTTT TGATGTCGAC AATGACCTTT
GTGGCCTATC TAAACGCCAA AGGTATGATC CAAATTATGG TGCAGAAGCT GTTCCCGCAG
AAGGTTTCTG TGCGTTTGTT GATGATCCAA GTGGCCTTAT TCGCGCTTAT CCTGTCGGCT
TTCTGTGATA ACGTCACCGC GACCTTAGTG TCTTTAGGCT TGTTAACGAC CTTTAAGCTC
GAAAAGCAAA TGCGCCGCAG AATGGCTGTG TTGATTATTT TCGCCGTGAA CTCTGGCGGT
GTCGCCCTGA TCACCGGTGA CGTCACCACT TTAATGATCT TCTTAGGCGG CCACGTACAC
ATCTCCGAAC TGTTGATGCT GTTTATCCCA TCTGCCGTGA GTGTGATTTT ACTGGCGACG
TTGTTCTCAT TGAAGGCTGA AGGCGTGGTG TCCACCACCC CAATTAAACA CAGCTATCAA
ACCGTGGATC TGCTCATTGC CTTAGTGTTC TTCTGCACGA TTCTGATGAC CATGCTGCTG
AACATTCTGT TTGGTATTCC ACCGGTACTG ACCTTCTTAA CCGGTCTGTC GATTATGTTC
CTTATCGGCC ACACGACCCG CAGTGATAAA GAAGAAATCA AGATCCTCGA ATATATTCGC
CAAGTCGAAT ACGACACCCT GTTGTTCTTC TTAGGGATTT TACTGCTGGT TGGTATGCTT
AAAGAAATCG GCACCTTAGA TATGCTGACC GAAGCTTACA GCCTGTTTAA TCCAAACATC
TCTAACTTCG TTACTGGTAT GGGTTCTGCC CTTATCGATA ACGTGCCATT GACGGCTGCG
CTGCTTAAAG CAGAGCCAGT ACTCAACACC CCAGAATGGT TAGGGTTAAC CTACAGTGTG
GGCGTGGGTG GTTCATTGTT AGTGATTGGT TCGGCTGCGG GTATCGTCGC CATGAGCAAA
GTGAAAGAAC TGACTTTCGT AAGCTATCTG AAATATGTGC CAGCCCTGTT CCTGTGCTAT
AGCATTGGTT ACGCCCTGAC CTTATTCCTG GCATACAATT TCTTTGCTTG A
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| Protein sequence | MPLNSSPLAC HDIKTAVGIA VMLYTFLIIL AVLALLSIIF EEVTHLNKAK TTLFFGCISW
VALFMAAGDA NHEKLVAHQL NENLLEIATL WLFLMSTMTF VAYLNAKGMI QIMVQKLFPQ
KVSVRLLMIQ VALFALILSA FCDNVTATLV SLGLLTTFKL EKQMRRRMAV LIIFAVNSGG
VALITGDVTT LMIFLGGHVH ISELLMLFIP SAVSVILLAT LFSLKAEGVV STTPIKHSYQ
TVDLLIALVF FCTILMTMLL NILFGIPPVL TFLTGLSIMF LIGHTTRSDK EEIKILEYIR
QVEYDTLLFF LGILLLVGML KEIGTLDMLT EAYSLFNPNI SNFVTGMGSA LIDNVPLTAA
LLKAEPVLNT PEWLGLTYSV GVGGSLLVIG SAAGIVAMSK VKELTFVSYL KYVPALFLCY
SIGYALTLFL AYNFFA
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