Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2843 |
Symbol | |
ID | 4253414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3397756 |
End bp | 3398193 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638119478 |
Product | transposase IS200-family protein |
Protein accession | YP_734971 |
Protein GI | 113971178 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.654156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGATT ACAGAAGTTC ATCACATGTT TACTGGCGTT GTAAATATCA TATCGTTTGG ACGCCTAAGT ACAGATTCAA AATTCTAAAA GGTAATCTTG GTAAAGAGCT CTACAGGTCG ATTTATATTC TATGCAATAT GAAAAGTTGT GAGGTCTTAG AATTAAACGT CCAGATAGAT CATGTGCATC TAGTCGTGAT AATTCACCCA AAGTTGTCAG TATCCACATT AATGGGGATA TTGAAGGGTA GGAGCGCAAT AAGGCTTTTT AACAAATTCC CTCATGTTCG TAAGAAGTTA TGGGGAAATA GCTTTTGGGC GAGGGGTTAT TTTGTTGATA CGGTAGGCGT AAATGAGGAA ATCATAAGAC GCTATGTTCG CCATCAAGAT AAGCAAGATC TAGAGCATGA TGCTCAATTG TCGCTACAGA TGAAGTAG
|
Protein sequence | MGDYRSSSHV YWRCKYHIVW TPKYRFKILK GNLGKELYRS IYILCNMKSC EVLELNVQID HVHLVVIIHP KLSVSTLMGI LKGRSAIRLF NKFPHVRKKL WGNSFWARGY FVDTVGVNEE IIRRYVRHQD KQDLEHDAQL SLQMK
|
| |