Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2796 |
Symbol | |
ID | 4253367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3346986 |
End bp | 3347900 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119431 |
Product | hypothetical protein |
Protein accession | YP_734924 |
Protein GI | 113971131 |
COG category | [S] Function unknown |
COG ID | [COG2035] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATATT TGCTGACCTA TTTTAAGGGA ATGGCCATGG GGGCCGCCGA TGTGGTGCCT GGGGTTTCGG GTGGCACTAT CGCCTTTATC ACCGGTATTC TCGATACCTT GCTCGAAAGC GTTAAACGTA TCAATCCTTC GCTTTGGGGC GTGATTAAGT CGCAGGGGAT TAAAGGCGCG TTTGAACATA TTAATGGTGG ATTTTTACTG AGCCTATTAG CGGGCATCCT GACCAGTATT TTTACCTTCG CTAAACTGAT TTCTTGGTTG CTGGCGGCAC ATCCCATTCC GATTTGGTCA TTCTTCTTTG GCCTCATCAT CATCTCTGTG GTGCACATGC TTAAACAGGT GAGTGGTTTT ACGCTGGCGC GTTTGGGATT ATTTGCCTTA GGGGTTCTGG CTGCTTGGGT GATCACTGTA CTGAACCCTG TATCGGTCGA GGCCAGCTAT TTAAATATTT TCTTCGGCGG TGCGATTGCC ATTTGTGCCA TGGTATTACC GGGGATTTCG GGCAGTTTTA TCTTATTACT GCTCGGCTTA TATCCAGTGG TACTCGCGGC GGCAAAAAAT ATCCAAATCG ATATCTTGGC CTGTTTTGCC GTTGGCGCTT TACTGGGAAT TTTAAGCTTT AGCCATTTAC TCTCGGCCTT GCTGCGTAAA TACCATGATG CGACCGTAGT ATTTCTCACG GGCTTGATGC TCGGCACCTT AGGTAAAATT TGGCCTTGGA AACAAACCTT AACCTGGCGT ACTAACTCCC ACGGTGAACA AGTGCCGTTA TTGGAGCAAA ATATTTCGCC GCTGAATTTT GAACAAGTGA CGGGCCAACC TTCACAGCTG ATGTTAGCTG TTGTGTGTAT GTTGGCGGCC ATCGCCTTAG TTTGGGGTTT AGAGAAGGTC GGCAAACGGG ATTAA
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Protein sequence | MKYLLTYFKG MAMGAADVVP GVSGGTIAFI TGILDTLLES VKRINPSLWG VIKSQGIKGA FEHINGGFLL SLLAGILTSI FTFAKLISWL LAAHPIPIWS FFFGLIIISV VHMLKQVSGF TLARLGLFAL GVLAAWVITV LNPVSVEASY LNIFFGGAIA ICAMVLPGIS GSFILLLLGL YPVVLAAAKN IQIDILACFA VGALLGILSF SHLLSALLRK YHDATVVFLT GLMLGTLGKI WPWKQTLTWR TNSHGEQVPL LEQNISPLNF EQVTGQPSQL MLAVVCMLAA IALVWGLEKV GKRD
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