Gene Shewmr4_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2796 
Symbol 
ID4253367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3346986 
End bp3347900 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID638119431 
Producthypothetical protein 
Protein accessionYP_734924 
Protein GI113971131 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATATT TGCTGACCTA TTTTAAGGGA ATGGCCATGG GGGCCGCCGA TGTGGTGCCT 
GGGGTTTCGG GTGGCACTAT CGCCTTTATC ACCGGTATTC TCGATACCTT GCTCGAAAGC
GTTAAACGTA TCAATCCTTC GCTTTGGGGC GTGATTAAGT CGCAGGGGAT TAAAGGCGCG
TTTGAACATA TTAATGGTGG ATTTTTACTG AGCCTATTAG CGGGCATCCT GACCAGTATT
TTTACCTTCG CTAAACTGAT TTCTTGGTTG CTGGCGGCAC ATCCCATTCC GATTTGGTCA
TTCTTCTTTG GCCTCATCAT CATCTCTGTG GTGCACATGC TTAAACAGGT GAGTGGTTTT
ACGCTGGCGC GTTTGGGATT ATTTGCCTTA GGGGTTCTGG CTGCTTGGGT GATCACTGTA
CTGAACCCTG TATCGGTCGA GGCCAGCTAT TTAAATATTT TCTTCGGCGG TGCGATTGCC
ATTTGTGCCA TGGTATTACC GGGGATTTCG GGCAGTTTTA TCTTATTACT GCTCGGCTTA
TATCCAGTGG TACTCGCGGC GGCAAAAAAT ATCCAAATCG ATATCTTGGC CTGTTTTGCC
GTTGGCGCTT TACTGGGAAT TTTAAGCTTT AGCCATTTAC TCTCGGCCTT GCTGCGTAAA
TACCATGATG CGACCGTAGT ATTTCTCACG GGCTTGATGC TCGGCACCTT AGGTAAAATT
TGGCCTTGGA AACAAACCTT AACCTGGCGT ACTAACTCCC ACGGTGAACA AGTGCCGTTA
TTGGAGCAAA ATATTTCGCC GCTGAATTTT GAACAAGTGA CGGGCCAACC TTCACAGCTG
ATGTTAGCTG TTGTGTGTAT GTTGGCGGCC ATCGCCTTAG TTTGGGGTTT AGAGAAGGTC
GGCAAACGGG ATTAA
 
Protein sequence
MKYLLTYFKG MAMGAADVVP GVSGGTIAFI TGILDTLLES VKRINPSLWG VIKSQGIKGA 
FEHINGGFLL SLLAGILTSI FTFAKLISWL LAAHPIPIWS FFFGLIIISV VHMLKQVSGF
TLARLGLFAL GVLAAWVITV LNPVSVEASY LNIFFGGAIA ICAMVLPGIS GSFILLLLGL
YPVVLAAAKN IQIDILACFA VGALLGILSF SHLLSALLRK YHDATVVFLT GLMLGTLGKI
WPWKQTLTWR TNSHGEQVPL LEQNISPLNF EQVTGQPSQL MLAVVCMLAA IALVWGLEKV
GKRD