Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2793 |
Symbol | |
ID | 4253364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3343112 |
End bp | 3344386 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119428 |
Product | hypothetical protein |
Protein accession | YP_734921 |
Protein GI | 113971128 |
COG category | [S] Function unknown |
COG ID | [COG3681] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTC AATGGCAGCA ATACATTCAG ATTATTAACC AAGTGGTTAA ACCCGCCCTA GGCTGTACCG AGCCGATTGC CGCCGCCTAT GCGGCGGCCG TGGCCCGTAC ATTATTGCCC GTAGAGCCAG AGTCAATTGC AGTACAAGTT TCAGATAATC TGTATAAAAA CTCGATGGGC GTCTATGTCC CCGGCACAGG CAAAATCGGC CTTGCTATCG CTGCGGCTGC GGGCGCGCTT GCGGGCGATG CCGAAGCGGG ACTCGAAGTC CTTGCCAACG TTACTCCGGA GCAAGTCACC AAGGCGCAAA CCCTAATCGA TGCGGGAAAA GTGAAGGTAG AGCGAACCGA GACTGACGAA TTTATTTATT GCTGCGTGAG CTTAACCGCT GGTGAGCAAG AGGCCATGGT GAAAATCTGT GGCGGCCATA CCTTAATTGC CGAGAAGCGT TTAAACGGTG AACTGGTGTT TACCGCAGAT AACGCCCAAG CCAAGGCCAC AGGCTCAATC TGCGATGGTA TAGATATCAA TATTGAGTCG ATTTACCGCT TCGCCCAGGA AGTACCCTTC GAAGAAATCC AATTTATCCT TAAAGCCTCT GAATTAAATA GTAAATTATC CGATGAAGGC ATGTCCAAAC CCTATGGTTT GGAAGTTGGC CGTACCATGA AAAACGGCAT TGCCGCTGGG ATCATCGGTG AGGACTTACT CAATAAGATT GTGATGCTCA CCGCGGCGGC TTCGGATGCG CGTATGGGCG GCGCTAATCT GCCCGCCATG AGCAATTTAG GCAGTGGTAA CCAAGGGATT GCGGCGACGA TTCCTGTGGT GATCACCGCC CAATGTTATA AGGTCAGCGA AGAGAAACTG GCTCGCGCGC TGATCATGAG CCACCTCGGG GCGATTTATA TCAAATCCCA CTACCCGCCG TTATCGGCAT TCTGTGGCAA TACGGTCACC AGTGCCGCAG CCTCTATGGC CATGGTGTAT TTAGCGGGCG GCAGCTTCGA GCAATCCTGC TATGCGATTC AAAACGTCAT CAGTGACAGC TCGGGCATGG TCTGTGACGG TGCCAAAGCC TCCTGCGCTA TGAAGGTCAG TACCTCTTCG AGTGCGGCGG TACGTTCATT CTTAATGGCG CTAAGTAGCC AAAACGTGTC AGGCCAAGGC ATCATAGCCA AAGATGTAGA GAAAACCATT AAGAACATAG GCAAAATGGT ACTTAACGGC ATGTCATCTA CGGATGTCAC CATCATTAAT ATCATGTCAG AATAA
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Protein sequence | MKPQWQQYIQ IINQVVKPAL GCTEPIAAAY AAAVARTLLP VEPESIAVQV SDNLYKNSMG VYVPGTGKIG LAIAAAAGAL AGDAEAGLEV LANVTPEQVT KAQTLIDAGK VKVERTETDE FIYCCVSLTA GEQEAMVKIC GGHTLIAEKR LNGELVFTAD NAQAKATGSI CDGIDINIES IYRFAQEVPF EEIQFILKAS ELNSKLSDEG MSKPYGLEVG RTMKNGIAAG IIGEDLLNKI VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVITA QCYKVSEEKL ARALIMSHLG AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC YAIQNVISDS SGMVCDGAKA SCAMKVSTSS SAAVRSFLMA LSSQNVSGQG IIAKDVEKTI KNIGKMVLNG MSSTDVTIIN IMSE
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