Gene Shewmr4_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2793 
Symbol 
ID4253364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3343112 
End bp3344386 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content51% 
IMG OID638119428 
Producthypothetical protein 
Protein accessionYP_734921 
Protein GI113971128 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTC AATGGCAGCA ATACATTCAG ATTATTAACC AAGTGGTTAA ACCCGCCCTA 
GGCTGTACCG AGCCGATTGC CGCCGCCTAT GCGGCGGCCG TGGCCCGTAC ATTATTGCCC
GTAGAGCCAG AGTCAATTGC AGTACAAGTT TCAGATAATC TGTATAAAAA CTCGATGGGC
GTCTATGTCC CCGGCACAGG CAAAATCGGC CTTGCTATCG CTGCGGCTGC GGGCGCGCTT
GCGGGCGATG CCGAAGCGGG ACTCGAAGTC CTTGCCAACG TTACTCCGGA GCAAGTCACC
AAGGCGCAAA CCCTAATCGA TGCGGGAAAA GTGAAGGTAG AGCGAACCGA GACTGACGAA
TTTATTTATT GCTGCGTGAG CTTAACCGCT GGTGAGCAAG AGGCCATGGT GAAAATCTGT
GGCGGCCATA CCTTAATTGC CGAGAAGCGT TTAAACGGTG AACTGGTGTT TACCGCAGAT
AACGCCCAAG CCAAGGCCAC AGGCTCAATC TGCGATGGTA TAGATATCAA TATTGAGTCG
ATTTACCGCT TCGCCCAGGA AGTACCCTTC GAAGAAATCC AATTTATCCT TAAAGCCTCT
GAATTAAATA GTAAATTATC CGATGAAGGC ATGTCCAAAC CCTATGGTTT GGAAGTTGGC
CGTACCATGA AAAACGGCAT TGCCGCTGGG ATCATCGGTG AGGACTTACT CAATAAGATT
GTGATGCTCA CCGCGGCGGC TTCGGATGCG CGTATGGGCG GCGCTAATCT GCCCGCCATG
AGCAATTTAG GCAGTGGTAA CCAAGGGATT GCGGCGACGA TTCCTGTGGT GATCACCGCC
CAATGTTATA AGGTCAGCGA AGAGAAACTG GCTCGCGCGC TGATCATGAG CCACCTCGGG
GCGATTTATA TCAAATCCCA CTACCCGCCG TTATCGGCAT TCTGTGGCAA TACGGTCACC
AGTGCCGCAG CCTCTATGGC CATGGTGTAT TTAGCGGGCG GCAGCTTCGA GCAATCCTGC
TATGCGATTC AAAACGTCAT CAGTGACAGC TCGGGCATGG TCTGTGACGG TGCCAAAGCC
TCCTGCGCTA TGAAGGTCAG TACCTCTTCG AGTGCGGCGG TACGTTCATT CTTAATGGCG
CTAAGTAGCC AAAACGTGTC AGGCCAAGGC ATCATAGCCA AAGATGTAGA GAAAACCATT
AAGAACATAG GCAAAATGGT ACTTAACGGC ATGTCATCTA CGGATGTCAC CATCATTAAT
ATCATGTCAG AATAA
 
Protein sequence
MKPQWQQYIQ IINQVVKPAL GCTEPIAAAY AAAVARTLLP VEPESIAVQV SDNLYKNSMG 
VYVPGTGKIG LAIAAAAGAL AGDAEAGLEV LANVTPEQVT KAQTLIDAGK VKVERTETDE
FIYCCVSLTA GEQEAMVKIC GGHTLIAEKR LNGELVFTAD NAQAKATGSI CDGIDINIES
IYRFAQEVPF EEIQFILKAS ELNSKLSDEG MSKPYGLEVG RTMKNGIAAG IIGEDLLNKI
VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVITA QCYKVSEEKL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC YAIQNVISDS SGMVCDGAKA
SCAMKVSTSS SAAVRSFLMA LSSQNVSGQG IIAKDVEKTI KNIGKMVLNG MSSTDVTIIN
IMSE