Gene Shewmr4_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2744 
Symbol 
ID4253315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3276811 
End bp3277836 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content52% 
IMG OID638119379 
Producthypothetical protein 
Protein accessionYP_734872 
Protein GI113971079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCACG CCGACAGCGC AGTACTCAGA ATTAGCCTTG GCACCGCATT AACTGTGTTT 
GTGTGTTTTG GTTTAGGGCT ACCTATGCCA CATCTTGGTT GTATTATGGC ATGGGTCATT
TTATGCCGCC CCGGCGAGGC GCTGAGTTTA AAAAAGGGCA TTATCGGTGG CGCGCTCTTG
TCGCTCATCA TGACTGCCGG CGTATTGCTA GTTCCCCTAT TGAGCTATTA CACCTTAGCC
GCAGTGCTTT TAGTGGCGTT ACTACTGTAC TTTTTGATGC TCATGTCGGT CACTGGTAAA
GGCGTGCTAG CCATGTTACT GACGATGGCC ATTACGCTCA TTCCTGTGGC AGGGTTAATA
GAGCAAGCAT TAGCACTCGC TATCGCACAG TTGATTGCTA TCGGGGTATT AATTGGCACT
TTAGTCAATG GCATCGCCCA TGCCCTTTTC CCCCCCGCCC CCTTAACAGC CGCAAAACAG
CCTGTACTAT CGCCTCCAGA ACACCCCAAA AGACTGGCGC TACGCGCCAC GATTATTGTC
ATCCCAGTGT GGTTACTCGC ACTCAGCGAT CCGGCGTTTT ATATCCCCGC GGTGATGAAG
ACTGTGATGC TGGCACAACA AAGTACCCTA CTGAACGCAA AGCAAGCGGG TAAGGAGTTG
GTGCTATCCA CCCTGATGGG CGCCCTACTG GCATTCGCGT TGTGGATGGG ATTAAGCATT
TGGCCTTCGC TCTTAATGCT TGTTCTGCTA CTTAGCCTGA TGACGATATG GCTAGCACAA
CGGTTGATCC AATTAGTCCC TACGGGCTTT CCTCCTTCGT TTTGGAGTAA TAGTTGGATC
ACCGCCCTCA TCTTATTTGG GCCTGCGATC GCCGATAGCG CGAATGGTAA AGATGTGTGG
TTGGCCGCCG CGATGCGCTG TGGTCTGTAT TTGTTAGTCG CTGGTTATGG TTGGCTTTGC
TTTATGGTAC TCGAGCAGCG ATGGCCCGCT GGCCGGCCCG CCGCAGAATC CCCTGTTGGA
GAATAA
 
Protein sequence
MHHADSAVLR ISLGTALTVF VCFGLGLPMP HLGCIMAWVI LCRPGEALSL KKGIIGGALL 
SLIMTAGVLL VPLLSYYTLA AVLLVALLLY FLMLMSVTGK GVLAMLLTMA ITLIPVAGLI
EQALALAIAQ LIAIGVLIGT LVNGIAHALF PPAPLTAAKQ PVLSPPEHPK RLALRATIIV
IPVWLLALSD PAFYIPAVMK TVMLAQQSTL LNAKQAGKEL VLSTLMGALL AFALWMGLSI
WPSLLMLVLL LSLMTIWLAQ RLIQLVPTGF PPSFWSNSWI TALILFGPAI ADSANGKDVW
LAAAMRCGLY LLVAGYGWLC FMVLEQRWPA GRPAAESPVG E