| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2718 |
|---|
| Symbol | |
|---|
| ID | 4253289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3244417 |
|---|
| End bp | 3245454 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638119353 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_734846 |
|---|
| Protein GI | 113971053 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.015858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0199347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGTTA TTATGAGTGT AGGTCAAGTT GGAAAATATC AACTGTTACG ACATTTAGGT
AATGGCGCAT TTGGAGATGT TTATTTAGCT CACGATCTTG CTCTAGATGC ACAGAAAGCA
ATCAAAATAC TTAATGCTCC AGATGCTGCT GATGTAATGA AGAAGCTAGA AGAAGCCCAG
ATTCTTCATA AATGCATGCA TAAAAATATC GTACATATAA ATGAAGCAAA TGTTTATGAT
ATAAATTCGT CTTCACACGT AATTATTGAT ATGGAATATT TACCGCTTGG TAGCTTTGAA
GATGCCATCA AGAGCAATAG CGTTTCAATT CATACCACAT TGCGGCTAAT CGTTGATTGT
TTGTTCGCTT TGGAACATGC TCATATAAAC GGGATACTTC ATCGGGATGT AAAACCAGCG
AATATTATGC TTTGCGATTT CGGTGCAAAA TTGTCTGATT TTGGTCTAGC TACTGTTTTA
GGATTGCAGA TGGCTGGCTC TCCACGAGGA TATACGACCC ATTTACCTCC AGAGTATTTT
ATAAGCCGTC GCACAACGGA ACTAACAGAT ATTTTTGCTG TTGGTGTTAC ATTGTTTCGC
GCTTGTAATT ATGTCAGTGA TTGGGAAAGT GCTGTCAGAA GTTTTATAAA TCCGACAGCT
CTTATTCATG CTGGTCAGCT CGTAAGCTCC ATTGGGTTCG CTCCGTTTAT TCCTATAAAA
CTCAAGAGAA TCATTAATAA AGCTTGCTCA CCAAATCCCA GTCAACGATA CCAAAGCGCG
GCAGAATTTC GACAAGCAAT TGAAAAATTA TCCCCAAAAA TTGATTGGGT ACCCGTTGGT
CAAAATTCGT TTCAAGGTGT GAGCTGTGGT ACTCAAATAC CTTTCTCTAT ATCGCTTGTA
CCAACAAGGA CTGCATTTAA TGTTGAAGTG AAAAAGAATA ACAGAAAGTT AGGGGGGGAT
TGCCAGTCAT TTAATGATAT TGATACTGCC AATAAATACA TATTTAATTA CGTATCATCG
TCTTTGTTTG TGCGATGA
|
|---|
| Protein sequence | MDVIMSVGQV GKYQLLRHLG NGAFGDVYLA HDLALDAQKA IKILNAPDAA DVMKKLEEAQ
ILHKCMHKNI VHINEANVYD INSSSHVIID MEYLPLGSFE DAIKSNSVSI HTTLRLIVDC
LFALEHAHIN GILHRDVKPA NIMLCDFGAK LSDFGLATVL GLQMAGSPRG YTTHLPPEYF
ISRRTTELTD IFAVGVTLFR ACNYVSDWES AVRSFINPTA LIHAGQLVSS IGFAPFIPIK
LKRIINKACS PNPSQRYQSA AEFRQAIEKL SPKIDWVPVG QNSFQGVSCG TQIPFSISLV
PTRTAFNVEV KKNNRKLGGD CQSFNDIDTA NKYIFNYVSS SLFVR
|
|---|
| |