| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2699 |
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| Symbol | |
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| ID | 4253270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3216533 |
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| End bp | 3219658 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119334 |
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| Product | hypothetical protein |
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| Protein accession | YP_734827 |
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| Protein GI | 113971034 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000707036 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAC AACGCCCCGA TTTTATCTAT CCCCCTGGCA GTATGTTAAT GCACTCGCCC
TTAGTGTTGA ATAAAGCCGA TATGTACGGT TTTTTTCTCA AGGGAAAACT CGCCAACCTG
CAGCGCTCCA TTGATAAAAC GCTCAATCAA GTGGCCGGAA GCGCCATGTA CTTTAAAGTG
CTGTCGCCCT ATGTACTGAC AACCTTTACC CAAATCGAGA AAGCCTATTC AGAAGACCCG
ACCGACAGGG CCAAGGGTTG GATCCAAGAA ACCGACATCA TCACTTGGGT CATGGTCGGT
CGCCAAGACA ATAGCAACGG CGCATCCATC AGCCATGTGT ATTTTCAGCC GCTGCATATT
TGGGTGAATG ATGCGATGGC CCTGATCAAT GGCCGCGAGT TGTTCGGTTA TCCCAAGTAT
TTGTGTGAAT ACACTATGCC CGCGGTCGGA GAGCCATTAA CTCGACTCTC CCTAGCAACA
AAGAGCTTCT TACACTTTAG CCCTGACACT GAACTTGCCA TGCACCCGCT GATTGAGGTG
AATTGCAATG CCAAGCCCGA GGCGCAGCTC ACCACGCTAG AAGCCATAGC CCAAACCTGG
CAACTCTTTA AAGAACAAAC GGATTTTATT CCAGAGCTGG ATAAGCTAGG TGAGGAGCAA
CTGTTTCACT TGCTGTTTAA GCCCGCTATC GACCAAGTGT TTTTAAAGCA GTTTCCGGAT
GCGTCAGGCC AAAAAGCGGT TTATCAGGCG ATTACGGCGG CGCCCGCACA GGTCAACAAA
GTGCACAGTG TTGCCCTGTT GGAAAATGAC TTTGTCGCCA CCATTTTTGA TAACGCCAGC
TTCCCACTCA AAGAGACCCT AGGCGTCGAG GTTGGCGAGC AACATGTATT ACTGCCCTAC
CATGTGAACT TTGACTTTGA AGTACCGCCG GGCGAAGTGC TGGTCGATAA TTCTGAAATC
AAAAAACAGA AAATTGCCAT TCTCGGCGGA GGCGTCGCCG CCATGACCGC CGCCTGTTAT
CTCACCGACA AGCCCGGCTG GCAGAATCAA TATGAGATTG ATGTCTATCA ATTAGGCTGG
CGAATCGGCG GCAAGGGCGC AAGTGGCCGT AATGCCGCAA TGGGACAACG GATTGAAGAG
CATGGCCTGC ATATCTGGTT TGGTTTTTAC CAGAATGCCT GCGCCTTGAT GCGTAAAGCC
TATGAAGAAT TAGACCGCCC GCCAGAAGCG CCGCTAGCGA CCTTCTTCGA TGCCTTTAAA
CCCCATAATT TTATTGTGCT GCAGGAGGAA ATTAATGGCC GCTCCGTTAG CTGGCCGATC
ACCTTTCCCA CACTCCCAGG GATCCCTGGA GATGGCACCG AAACCTTAAC CTTCTGGAAG
GTCGTTAAGG CCGCCTTTGC TTGGATAAAA GAATGGCTAA AGGACATGGA CTCCCTGCTG
GAAGCCGATG AAAAAGCCAT GGCGACACCG AAAAACTGGC TCGATATCAG CTGGTTTGAA
CGGCTGAAGG ATAAGTTAGA GGATTCGGTC GATGATGCGA TGGAATCCCT AGACGCCCTA
GGTGACAAGC TCGAATGCCA TTTTAATCAA ATGATTGGCC GCGAATGCGA TGAGCATGTC
CACAGCGAGA GTGACGATGG TTTGGTCGAA TCCGCCGTCG ATGCCCTGCA CCAAAGGTTG
GTTAAGCGCT TTAGCGACCA TTTAGACACT AACGATGAGT TACGCCATTT GTATATTGCC
GTCGACTTAG GCTTAACCAT CTTAAAAGGA ATGTTTGCCG ATGATGTGTT TGAAAAGGGT
TTCGATGCCA TCAACGACTA TGATTACCGC GAATGGCTAA CTAAACACGG CGCCAGCCAA
AAATACACGG TCGACAGCGC GCCGGTACGC GGTTTTTATG ATCTGGTGTT TGCCTACGAA
AGAGGCAACT TCGACAAACC CAATGTCGAA GCGGGGACTA TTATTCGCTC CATGCTGCGT
ATCGCCCTGT GTTATCAAGG CGGAGTCATG TGGAAAATGC AGGCGGGTAT GGGCGATGTG
GTCTTTACCC CTTACTATGA AGTGCTGAAA CGGCGCGGGG TGAACTTCCA CTTCTTCAAT
CGAGTTGATA ATTTAGAATG TCGCGACAAC AGCATTCAAG CGATTGAGAT CACAGAGCAA
GTCGCTCTGG CACCTTCGGT TAAAGACTAC AATCCACTCG TGGATGTTAA AGGCTTAGCT
TGCTGGCCCA GCACGCCAAA TTACGACCAG CTAGAGCCTG TTCAAGCCGC ATTGCTAAAA
GCCCATGATA TTAATCTTGA GCACTTCTGG AGCGATTGGG ACAATCTGTA CGAGGCGCAA
TTTGGTCAGG CGCTACCGAA AAAACGTCTG CAAAAAGGCG TGGACTTCGA CAAAGTGATT
TTTGGTCTGT CATTAGGAGC GGTTCCCCAT GTGGCGAGCG AAGTTATGGC GCAGAGTCCG
GCGCTCAAAA CCTGTGTCGA TAAAGTGCAG ACAGTCGCGA CCCAAGCCTA TCAACTGTGG
ATGAATCAAG ATCTTAATGG TATTGGTTGG CCCAATTATT CAGAGGATGG CGAGCAGCCA
GTCTTATCCG GCTTTACCGA GCCCTTCGAT ACGTGGGCAT CGATGGACCA ATTGCTCGAT
AAAGAAGACT GGCGGGGCAT AGAGCCAAAA AATGCCAGCT ATTTCTGCTC GGCGTTGCCT
GTGGATGCTT ATCCTCCGCG TACGGATATT GGTTTCCAGC AGCGCAAAAC CGCCGAAGCC
AAGGCTGGCG CCATCAATCA ACTCAATACA GAAATTCATA AGCTGTGGCA GCAGGTTGGC
GACAGCTTCC CCTGGGAATG GTTGCACGAT GAACAGCAGC GCCAAGGCGA AGCGCGATTC
GATAGTCAAT ATTGGCGCGC CAATGTGGAT CCTTCCGAGC GTTATGTCCT GTCAGTGAAA
GGCAGCTCCC AATATCGGAT CACCACGGAT GGCACAGGTA TCGACAATCT GTATATGACG
GGAGATTGGA TTAAAACCGG CCTCAACGCC GGTTGTGTGG AAGCTGCGAC GATGGCGGGA
ATGCATACTG CCAAAGCCAT ATGCGGCCAT CCGGCCATTA TCAAAGGCGA AAAGGACTTC
GCCTAA
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| Protein sequence | MEKQRPDFIY PPGSMLMHSP LVLNKADMYG FFLKGKLANL QRSIDKTLNQ VAGSAMYFKV
LSPYVLTTFT QIEKAYSEDP TDRAKGWIQE TDIITWVMVG RQDNSNGASI SHVYFQPLHI
WVNDAMALIN GRELFGYPKY LCEYTMPAVG EPLTRLSLAT KSFLHFSPDT ELAMHPLIEV
NCNAKPEAQL TTLEAIAQTW QLFKEQTDFI PELDKLGEEQ LFHLLFKPAI DQVFLKQFPD
ASGQKAVYQA ITAAPAQVNK VHSVALLEND FVATIFDNAS FPLKETLGVE VGEQHVLLPY
HVNFDFEVPP GEVLVDNSEI KKQKIAILGG GVAAMTAACY LTDKPGWQNQ YEIDVYQLGW
RIGGKGASGR NAAMGQRIEE HGLHIWFGFY QNACALMRKA YEELDRPPEA PLATFFDAFK
PHNFIVLQEE INGRSVSWPI TFPTLPGIPG DGTETLTFWK VVKAAFAWIK EWLKDMDSLL
EADEKAMATP KNWLDISWFE RLKDKLEDSV DDAMESLDAL GDKLECHFNQ MIGRECDEHV
HSESDDGLVE SAVDALHQRL VKRFSDHLDT NDELRHLYIA VDLGLTILKG MFADDVFEKG
FDAINDYDYR EWLTKHGASQ KYTVDSAPVR GFYDLVFAYE RGNFDKPNVE AGTIIRSMLR
IALCYQGGVM WKMQAGMGDV VFTPYYEVLK RRGVNFHFFN RVDNLECRDN SIQAIEITEQ
VALAPSVKDY NPLVDVKGLA CWPSTPNYDQ LEPVQAALLK AHDINLEHFW SDWDNLYEAQ
FGQALPKKRL QKGVDFDKVI FGLSLGAVPH VASEVMAQSP ALKTCVDKVQ TVATQAYQLW
MNQDLNGIGW PNYSEDGEQP VLSGFTEPFD TWASMDQLLD KEDWRGIEPK NASYFCSALP
VDAYPPRTDI GFQQRKTAEA KAGAINQLNT EIHKLWQQVG DSFPWEWLHD EQQRQGEARF
DSQYWRANVD PSERYVLSVK GSSQYRITTD GTGIDNLYMT GDWIKTGLNA GCVEAATMAG
MHTAKAICGH PAIIKGEKDF A
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