| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2674 |
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| Symbol | |
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| ID | 4253245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3192357 |
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| End bp | 3193766 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119309 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_734802 |
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| Protein GI | 113971009 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC CAACGCTTTT CTATCATCTA CAGGACGTCG AGACCGAGCA GGCATTAGTG
CAGCTCGAGG GCGCGCAGAC CTACAACAAG CTACGCAGTA CCGATGATTT ATCTTGGATT
AGTCAGCTGG AGGCCAATCG TATCGATGTG GCGATCATTG AGCTGCCCCG TCTAAGCCGT
GAGGATTACT TAGCCTTACT CGAGTCCAGC GCCATTGCGG ATGTGGAGTT TATTTTCCTC
TCCGATGGCC TACCGAATCC TCATCTCGAT AAACTCTTAT CCAAATACGC GGGCTACCAT
TTCCGTAAGC CCATCGATAT GTCGTTGCTG TGCGAAACCT TAGCGGATTT TGCCCAGCAT
CTGGTTGCCA ACACTTCGAC GCGCATTCGC CCCTTTGCTA GCGAATTAGA CCAATATGGT
CTGCTGGTGG GTTCCTCGTT ACCTATGCAC CGTTTGTATC GCACTATCCG CCGCGTGTCG
GCCGCCGAGA GCAATGTGTT GATTATCGGC GAGAGTGGCG CAGGTAAAGA ACTGGTCGCC
AATACCATTC ACTTAGCCAG CCCGCGGGTG AATAAGCCTT ATATTGCGAT TAACTGCGGC
GCCTTGAGCC CAGAATTGGT CGATAGTGAA CTCTTCGGCC ATGTAAAAGG CTCTTTCACT
GGTGCGAATC GTGATCATCA AGGGGTATTT GAGCAGGCCG AAGGCGGCAC CTTATTCCTC
GATGAAGTCA CCGAAATGCC CCTAGAGCAT CAAGTTAAGC TATTAAGAGT GCTTGAAAAT
AATGAATATC GTCCCGTCGG TAGCCCTAAG GTGCTCAAGG CCAATGTGCG TATTGTGGCG
GCGACAAACC GCGATCCTTT AGTGGCGATA GAGCAAGGAC AATTGCGGGA AGATTTGTAC
TTTCGCTTAG CGCATTTCCC CATTCAAGTG CCGCCATTGC GGGAGCGCGG GGAAGATATA
GTGGGACTTT CGAAGCATTT TCTGGCCTAT CGCAATGCGG CGGAAAAACA GAGCAAAGCG
TTCTCGCCCT CAAGTTTAGA GGCGATTGCG GCCCACACTT GGCCTGGGAA TGTGCGCGAG
TTAAAGCATG CTATTGAGCG CGCTTATATT CTGGCGGACC ATGAGATTAC CCCTGAGCAT
TTACAGCTTA CGCCCAGTTT GGAAAAAGAG ACGACTGCGG AGGAAAATGT AGTGATCCCC
CAAGGTATGC GCCTTGAGGA GCTAGAAAAA ATCGCCATTT ACCAAGCGCT TGAAACGAGT
CTGGGCAATA AGACCGACAC CGCCGAGCAG CTTGGGATCA GCGTTAAAAC CCTCTATAAC
AAGCTCAGTA AATATGAGCA GGAGTCAGAC GTTCAAACCG TTGTTGATGC CGTTAGCGAA
GATTCCGTTA GCAATAGCGT CGCCAAGTAG
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| Protein sequence | MIRPTLFYHL QDVETEQALV QLEGAQTYNK LRSTDDLSWI SQLEANRIDV AIIELPRLSR
EDYLALLESS AIADVEFIFL SDGLPNPHLD KLLSKYAGYH FRKPIDMSLL CETLADFAQH
LVANTSTRIR PFASELDQYG LLVGSSLPMH RLYRTIRRVS AAESNVLIIG ESGAGKELVA
NTIHLASPRV NKPYIAINCG ALSPELVDSE LFGHVKGSFT GANRDHQGVF EQAEGGTLFL
DEVTEMPLEH QVKLLRVLEN NEYRPVGSPK VLKANVRIVA ATNRDPLVAI EQGQLREDLY
FRLAHFPIQV PPLRERGEDI VGLSKHFLAY RNAAEKQSKA FSPSSLEAIA AHTWPGNVRE
LKHAIERAYI LADHEITPEH LQLTPSLEKE TTAEENVVIP QGMRLEELEK IAIYQALETS
LGNKTDTAEQ LGISVKTLYN KLSKYEQESD VQTVVDAVSE DSVSNSVAK
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