| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2673 |
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| Symbol | |
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| ID | 4253244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3190573 |
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| End bp | 3192270 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119308 |
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| Product | hypothetical protein |
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| Protein accession | YP_734801 |
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| Protein GI | 113971008 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
[COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTA GGATCCACAT TAAGTATTTC TACCTGTTCG GAGCGCTGTT ATTTGGCTAT
TTCGCCGTAA GGGGCCACTC CCCTATCCTC ACCTTTATTT GGGCATGGAG CAGCCTTTCC
CTCGCCCTTG TCGGCTCAGC CTATTGGTTT AATCTCGCCA GTATTTTTAG AAAACGTCAG
GATGGATCCA TCCCTTGGTA TATCCGTTGG GGCTTTATTC CATTTTTATT AGGATGCCGA
CTCTATAATC TCTGGGCACG GCGCCGCGAT AGCGTGCCTT CAATGCAAGC CATTGATAAA
TATCTATACT TGGGTAGCCG CTTAAGCGCT GCCGATTTAC CTAAACTGAA TCGTTATGGC
ATTACCGCCA TTTTAGATGT CACCGCCGAA TTCGACGGCC TCGATGTGTC CCTGTATGAG
GATCATATTG ACTATCTGAA TATCCCTATT CTTGACCACA GTGTGCCGAC TAGCGCCCAA
TTAAATCAGG CGATTAACTG GTTACATCGC CAAGTACGCG CCCAAAAGCG GGTATTAATC
CACTGCGCGC TCGGCCGCGG GCGTTCCGTA ATGGTGCTGG CCGCTTATCT TGTGTGCCGC
CGCCCCGAAC TCAGCTTCGC CGAGGTGCTG CAACAGATTA AAAGCATTCG TAAAACCGCA
GGCTTAAATC GCTGGCAACT CAAAGCGCTG GAGCAGATGT ACACTCAAGG GGAAATCAAA
CTGCATAAGC GAGCCTGGAT TATCGCCAAT CCCGTCTCTG GCGCGGGTAA ATGGCAGAGC
CATGGCGAAC AAATTTGCAC TGAGCTGAAA CGCTATTTTG AGGTGCAGTT AGCGCTCACC
ACGCCAGAGA TTAGCGCCCA AACCCAAGCG AAAAAAGCAC GGCTTCAGGG CGCCGATATC
ATCATCGCTT GCGGGGGCGA TGGCACAGTC ACAGAGGTCG CGGCGGAGAT TATCGACACA
GATATCACCT TAGGCATTAT CCCGCTAGGC ACCACTAATG CCCTATCACA CGCCCTCTTT
GGTTTAAGCA GTAAGCTCAA TGCCGTCTCT CAAGCCCTTG ATAATATTAT CCAAGGCCAG
ACACAGACCA TAGACACGGC GCGTTGCAAT GCGCGACTGG TGTTACTGTT GGTCGGCATT
GGGTTTGAGC AGCAAATGAT TGAGTCGGCG AGCCGCGAGC GTAAAAATGC CCTCGGCCAA
CTCGCCTACC TCGATGGTTT GTGGCGCGCG GTGAACACCG ACACCAACCT CGAGTTGCAG
CTGACTTTAG ATGACCAAAC CCCAATGACA GTGCAAACCC ACAGCCTAGT GGTTGCCAAT
GCCGCACCTT TTACCAGCTT ACTCGCCCAA GGTAAGGGCG AACCCAATAT GACCGACGGC
TTGTTGGATA TCACTTGGTT AGATTCAAAT AATGAGCCAA ATGAACAGCT TATCAGTTTG
GCTGAACTGG CTTTTACCGG CTGGATTAAA GAGGCCGCCA ATAGCGACTC TGCGCCCTCG
GCCAACACGG GTAAAGTGAA ACATGCCCAC GCGAAAAAGG TGAAGATCAG CAGTCAGCCC
CCATGCAAGT ATGTGATTGA TGGCGAGATT TGTGAGCCGG AGGAACTCAA TATCGATATC
CTGCCCGCCT CTTTGAAGGT GTTTGTGCCC TATCAAGCGC AAAATGCTGA ACCGCAGTTA
GAGTCAAAAA TAAGCTAA
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| Protein sequence | MLSRIHIKYF YLFGALLFGY FAVRGHSPIL TFIWAWSSLS LALVGSAYWF NLASIFRKRQ
DGSIPWYIRW GFIPFLLGCR LYNLWARRRD SVPSMQAIDK YLYLGSRLSA ADLPKLNRYG
ITAILDVTAE FDGLDVSLYE DHIDYLNIPI LDHSVPTSAQ LNQAINWLHR QVRAQKRVLI
HCALGRGRSV MVLAAYLVCR RPELSFAEVL QQIKSIRKTA GLNRWQLKAL EQMYTQGEIK
LHKRAWIIAN PVSGAGKWQS HGEQICTELK RYFEVQLALT TPEISAQTQA KKARLQGADI
IIACGGDGTV TEVAAEIIDT DITLGIIPLG TTNALSHALF GLSSKLNAVS QALDNIIQGQ
TQTIDTARCN ARLVLLLVGI GFEQQMIESA SRERKNALGQ LAYLDGLWRA VNTDTNLELQ
LTLDDQTPMT VQTHSLVVAN AAPFTSLLAQ GKGEPNMTDG LLDITWLDSN NEPNEQLISL
AELAFTGWIK EAANSDSAPS ANTGKVKHAH AKKVKISSQP PCKYVIDGEI CEPEELNIDI
LPASLKVFVP YQAQNAEPQL ESKIS
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