Gene Shewmr4_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2652 
Symbol 
ID4253223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3158632 
End bp3159645 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content47% 
IMG OID638119287 
Producthypothetical protein 
Protein accessionYP_734780 
Protein GI113970987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA TTACCACGCT TAGCCAATTT TTAACGACAG CCAAAACCCA ATTCCAAGTC 
TATGAATTAG GACGAAGAGT GCAGCACATC GATATGCTGG CCTTCCATCA AATCGAATCA
TTAGTCACGC CCTACCCTTA CCCCATTCAA GGGCATGCCC AATTTGCCAT CGTGTTTTGG
AATGAGAGCC AACAGCACTT TATTTGGTTC CTAAAGCTAC CGTTAGACGA ACAAGGACTG
CTCTCGCCTG CGCCGCGCTC ACAGTTTATT GAAATGGTAT TAACGGCACT GGGGCAAGAT
CCGACTCAGC CATTAACCGA TGAACAGCAG GATCGCCTCG CTAACAATCC GTTTAGCTTT
AAGCCAAGCC AAGAAAAACT GGCGGTATTT AACGCCTTAG TGCGTAAACA ATTAGGTTTA
AGCGCTTCAA TTCAATATGA ATTTGCAGTG CAATATCTCT CGGGACAAAT TGCCCCGAGT
GAATGGCAGC ATATTGGCCT GCAAGGTTTG AGCGACGTGT GTGTTCGCCT TGGCGAGTTA
GATCACGAGC AGCAACTCCT TGTCAGTTTT GACAATAGTG CGATTGAAGT ACAAATTGCC
CTGTGCCAAT GTCTCGAACA TCTGCATTTA ACAGAAGCGC TCGCCAATAA GCTTTACGAT
AAGTTTGTGA CGGCTCCTCC CGAATACCAA GCCTATTACT TGCGCGCACT CGCCTCCCAT
ACCGAATTGA GTCAGCGAGC CCTCGCCCAT CTTCAACAAA GCGAGCGCTT AGAGGCCAAT
GAACTTATCA GCATCGCGGG CCGAAACTGG ACCGTATTAA AGCAAGAGCT GAGTCGCAGT
ATTTACCTGG AAGCACTGGC ACGACAACCC CAAGCCTTTT TTAATCAGAT CTTTGCTGAT
ATTGTGGCGA TTCCCAGTTT GCGTAACCAC TTATTGGGGG AGCTCAGAAA CCCCAATCGG
AGTGTTCAAC TATCACAGGC CATTGGCGGC TTGTTTAAGG CTACAAGTAA ATGA
 
Protein sequence
MTEITTLSQF LTTAKTQFQV YELGRRVQHI DMLAFHQIES LVTPYPYPIQ GHAQFAIVFW 
NESQQHFIWF LKLPLDEQGL LSPAPRSQFI EMVLTALGQD PTQPLTDEQQ DRLANNPFSF
KPSQEKLAVF NALVRKQLGL SASIQYEFAV QYLSGQIAPS EWQHIGLQGL SDVCVRLGEL
DHEQQLLVSF DNSAIEVQIA LCQCLEHLHL TEALANKLYD KFVTAPPEYQ AYYLRALASH
TELSQRALAH LQQSERLEAN ELISIAGRNW TVLKQELSRS IYLEALARQP QAFFNQIFAD
IVAIPSLRNH LLGELRNPNR SVQLSQAIGG LFKATSK