Gene Shewmr4_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2578 
Symbol 
ID4253149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3066717 
End bp3067574 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content52% 
IMG OID638119213 
Producthypothetical protein 
Protein accessionYP_734706 
Protein GI113970913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA AAAACACCTT AATGCTCTTG GGTCTGTTAG CTGTCAGCCC CGCGGTATTT 
GCTGCAACAG GTATCGCCTT TGTCCACGGA ACGGGGCACC AAACCAATGC GTTAGCCGAC
TATTGGACGT CGGAGTTTGT TAACTCGGTG CGCCAAGGGA TCCCCGTTCC CAATAATTAC
ACTGTCATCA ACTGTGACTT CGACCAATAT ATGTGGGAAG AAACGGCCGC AGGCTGTCTT
GCCACTCAGC TCAATAGCTT TATTCAAGCG AAGAATATTG ATGATTTAAT CCTGCTCACC
CACTCCAATG GCGGCAATGT GGTGCGCTGG ATTTTATCCA ACCCCACCTG GGACAGCCGT
TATCCAGCGG TGATCAAAGC CACCTCCAGA GTCATCGCCC TCGCCCCCTC GAGTGGCGGC
ACGCCGCTGG CCGATGCGGT CAATCAAGGC AATGTGTTCG AAACCAGCCT AGGTTGGCTC
TTAGGTTATG GCAGCAATGC GGTCAAACAG CAGCAAGTCG GCTGGATGGC AAACTACAAC
AACACTTGGC TCTATGGCAC CTCGGGTCGG CCAAGTTTAG GTAAACCCTT CGAGGTGGTT
GTCGGTTCGG ATGTGGATTC TGCCATTTGG GACAGCGACA GCTACTGCGC TGGCTATCAA
TATCAGGTCG CCCTCGAAAC CACCCAAAAC TGGCTCGATA GCTGCTCCGA CGGCTTCTTA
AATTGCAGCT CGCAAAAAGC CGCAGGCACA GTCTGGTTTA CCGATAAACA AAAGACCCGA
GGCCAAGAAC CGTTAAGCCA TCAGCAGAGT CGCCGTGCCT GCTTTAACTT AGACACGCTG
ATCCGCAACC ATATTTAA
 
Protein sequence
MKIKNTLMLL GLLAVSPAVF AATGIAFVHG TGHQTNALAD YWTSEFVNSV RQGIPVPNNY 
TVINCDFDQY MWEETAAGCL ATQLNSFIQA KNIDDLILLT HSNGGNVVRW ILSNPTWDSR
YPAVIKATSR VIALAPSSGG TPLADAVNQG NVFETSLGWL LGYGSNAVKQ QQVGWMANYN
NTWLYGTSGR PSLGKPFEVV VGSDVDSAIW DSDSYCAGYQ YQVALETTQN WLDSCSDGFL
NCSSQKAAGT VWFTDKQKTR GQEPLSHQQS RRACFNLDTL IRNHI