Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2534 |
Symbol | |
ID | 4253105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3015913 |
End bp | 3017199 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638119169 |
Product | tagatose-bisphosphate aldolase noncatalytic subunit |
Protein accession | YP_734662 |
Protein GI | 113970869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4573] Predicted tagatose 6-phosphate kinase |
TIGRFAM ID | [TIGR02810] D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTGA TTCAAACTAT CATTGACGCC AATAAAGCAG GTCAGCAGGC GGGCATTTTT GCCGTCTGCT CGGCCCAGCC CTTGGTGTTA CAGGCGGCGC TATTGCAGGC AAAGGCGAAT GGCACGCCCT TACTTATCGA GGCGACCGCC AACCAAGTGA ATCAGTTTGG CGGTTATACC GGGATGAAAC CACAGGATTT CATCGACTTC GTCACTCAAA TGGCCATTGA ACTTGGCCTT GAACCTTCAC AATTACTCTT TGGCGGCGAC CACTTAGGCC CCGTCGTTTG GTGCCAGCAA GCCGCCGAAG AGGCGATGCA ATTGGCGGAA AACCTTATCG CCGAATATGT TAAGGCGGGA TTTACCAAAA TCCACCTCGA CACCAGCATG GCTTGTGGCG GTGATGTGCT TCCCTTAGCG GATGAACTTA TCGCGGCGCG TGCGGCGCGG CTCTGTGCGG TGGCCGAAGC CCATCGTGCG CCCGAGCAAG CGCTCTGTTA TGTGATAGGC ACCGAAGTGC CCGCGCCCGG CGGTGTGAGT GAGATGGAGG CCGAACTTGC GGTCACGCCT GTCAGTGCCA TTGAACATAC CTTAAATTGC CACCGCGATG CCTTTACTGC GGCAGGGCTG GGAGAGGAGG TGTGGCAAAA GGTGATTGCG GTTGTGGTTC AGCCTGGGGT GGAGTTTGAT AACAGCCAAG TGCATTTGTT CGAACCCGAG GCAACCCATG CCCAAAGTGA GTTCATTCGC AGTTATCCCA GATTAGTGTT TGAGGCGCAT TCGACCGATT ATCAGCTCAG CATGGGATAT CAGGCCTTAG TGCAGCAGCA TTTCGCGATT TTAAAAGTGG GCCCACAGCT TACCTTTGCT CTGCGGGAGG CCTTGTTTGC CCTGTCCCAT ATCGAAAATG TGCTGTGCCA GCCCGAGCAA TGCTCGGATT TACGCCAAAG CTGTTTTGAG TTGATGCGAG ATAACCCTAA GTATTGGCAA GGGTTTTATG CCGACAACGA GGCATTGAAG TGGCAACTGG GCTTTAGCTT TAGTGATCGA GTGCGTTACT ACTGGCCGAG CCTGCAAAAC AAGGTCGAGC AGCTATTGAG CAACTTAGCC CAGAGCATTC CTCTGCCGCT GATCAGCCAG TATTTACCGA ACCAGTATAC GGCGGTCTTG GCAGGGGAAC TTAAGCCCAC GGCCCGTGAA CTCGTACTGC ATAAAATTAC CGAAGTATTG GCCGATTACG CCAATGCCTG CCAGCTTCCT GTGATGCAAT CACCTTTAAA GGGATGA
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Protein sequence | MSVIQTIIDA NKAGQQAGIF AVCSAQPLVL QAALLQAKAN GTPLLIEATA NQVNQFGGYT GMKPQDFIDF VTQMAIELGL EPSQLLFGGD HLGPVVWCQQ AAEEAMQLAE NLIAEYVKAG FTKIHLDTSM ACGGDVLPLA DELIAARAAR LCAVAEAHRA PEQALCYVIG TEVPAPGGVS EMEAELAVTP VSAIEHTLNC HRDAFTAAGL GEEVWQKVIA VVVQPGVEFD NSQVHLFEPE ATHAQSEFIR SYPRLVFEAH STDYQLSMGY QALVQQHFAI LKVGPQLTFA LREALFALSH IENVLCQPEQ CSDLRQSCFE LMRDNPKYWQ GFYADNEALK WQLGFSFSDR VRYYWPSLQN KVEQLLSNLA QSIPLPLISQ YLPNQYTAVL AGELKPTARE LVLHKITEVL ADYANACQLP VMQSPLKG
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