| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2511 |
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| Symbol | |
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| ID | 4253082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2988689 |
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| End bp | 2989678 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119146 |
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| Product | cytochrome C family protein |
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| Protein accession | YP_734639 |
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| Protein GI | 113970846 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.115309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00672893 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAACA GCCACAAAAT GAAAAACCTA CTGCCGGCAT TGATGATGTC TGCAGTCATG
GCATTTGCCA TCGCACCGAG TGCTCACGCC TCCAAGTGGG ATGAAAAAAT GACGCCAGAG
CAAGTCGAAG CGACCTTAGA TAAGAAGTTT GCCGAAGGCA ACTACTCACC TAAAGGTGCC
GACTCTTGCT TGATGTGCCA CAAGAAATCC GAAAAAGTGA TGGACCTTTT CAAAGGCGTC
CACGGCGCTA TTGACTCCAC TAAGAGCCCA ATGGCTGGCC TACAATGTGA GGCTTGCCAC
GGACCTATGG GTCAACACAA CAAGGGCGGC AACGAGCCGA TGATCACTTT TGGTAAGCAA
TCGACCTTAA GTGCCGACAA GCAAAACAGC GTATGTATGA GCTGTCACCA AGACGATAAG
CGTATGTCTT GGAATGGCGG TCACCATGAC AATGCCGATG TTGCTTGTGC CTCGTGCCAC
CAAGTACACG TCGCGAAAGA CCCAGTGTTA TCTAAAAACA CTGAGATGGA CGTCTGTACA
AGCTGCCACA CTAAGCAAAA AGCGGATATG AATAAACGCT CAAGTCACCC ACTCAAATGG
GCACAAATGA CCTGTAGCGA CTGTCACAAT CCCCATGGGA GCATGACAGA TTCTGACCTG
AACAAGCCAA GCATTAACGA AACTTGTTAT TCCTGTCACG CCGAGAAGCG CGGCCCAAAA
CTCTGGGAGC ATGCACCCGT CACTGAAAAC TGTGTCACTT GTCATAATCC CCATGGCAGC
GTGAACGATG CCATGCTGAA AACCCGTGCG CCGCAGCTGT GTCAGCAATG TCACGCCAGC
GATGGCCACG CCAGCAATGC CTACTTAGGT AACACTGGTT TAGGTTCAAA TGTCGGTGAC
AATGCCTTTA CGGGTGGAAG AAGCTGCTTA AATTGCCATA GTCAGGTCCA TGGTTCTAAC
CATCCATCTG GCAAGCTATT ACAGCGCTAA
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| Protein sequence | MKNSHKMKNL LPALMMSAVM AFAIAPSAHA SKWDEKMTPE QVEATLDKKF AEGNYSPKGA
DSCLMCHKKS EKVMDLFKGV HGAIDSTKSP MAGLQCEACH GPMGQHNKGG NEPMITFGKQ
STLSADKQNS VCMSCHQDDK RMSWNGGHHD NADVACASCH QVHVAKDPVL SKNTEMDVCT
SCHTKQKADM NKRSSHPLKW AQMTCSDCHN PHGSMTDSDL NKPSINETCY SCHAEKRGPK
LWEHAPVTEN CVTCHNPHGS VNDAMLKTRA PQLCQQCHAS DGHASNAYLG NTGLGSNVGD
NAFTGGRSCL NCHSQVHGSN HPSGKLLQR
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